iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pma-094117

Ensembl Protein ID

ENSPMAP00000010400.1

UniProt Accession

S4RYV9; S4RYV9_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000009456.1	ENSPMAT00000010446.1	ENSPMAP00000010400.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-21	74.9	465	508

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.......sd.tllvsGsdDgtikvWDlrtgvll 36
           gH + v+cl +        d + l+sG+ D ++++WD+ ++ ll
   Q: 465  GHGGAVSCLLYpheaarrYDsRWLLSGAADFSVRLWDVLSQELL 508
           8********88999999944599**************9888776 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

MPDKERILPM VLWGLHAPNH CVSSLLLTED QHTIVTGCQD GQLCLWNLDE DLKVITPRAL 60
LFGHLAGVTC LGRANPLRDH PYVVSCDENG QMCLWDISDG RCVEFRQHPY VHTEMHYYKC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGGATA AGGAACGGAT CCTTCCCATG GTGCTTTGGG GTTTGCACGC CCCGAATCAC 60
TGCGTGTCCA GCCTGCTGCT CACAGAAGAC CAGCACACAA TTGTGACCGG ATGCCAAGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000634	Aegilops tauschii	33.57	1.00e-13	70.50
IUUC-Atr-002981	Amborella trichopoda	30.00	9.00e-09	55.50
IUUC-Aly-005882	Arabidopsis lyrata	28.79	1.00e-07	51.60
IUUC-Ath-006797	Arabidopsis thaliana	31.33	1.00e-07	51.60
IUUC-Bra-018098	Brassica rapa	31.25	6.00e-08	52.00
IUUC-Gma-044326	Glycine max	31.72	4.00e-10	59.70
IUUC-Lpe-051544	Leersia perrieri	30.77	2.00e-12	67.40
IUUC-Mtr-058676	Medicago truncatula	31.47	6.00e-11	62.40
IUUC-Mac-065659	Musa acuminata	26.90	4.00e-08	53.10
IUUC-Oba-075713	Oryza barthii	31.69	1.00e-12	67.80
IUUC-Obr-076894	Oryza brachyantha	29.35	1.00e-11	64.70
IUUC-Ogl-077521	Oryza glaberrima	31.69	1.00e-12	67.80
IUUC-Ogu-078103	Oryza glumaepatula	31.69	4.00e-12	66.20
IUUC-Oin-080169	Oryza indica	31.69	2.00e-12	67.80
IUUC-Olo-080818	Oryza longistaminata	31.69	1.00e-12	67.80
IUUC-Ome-081902	Oryza meridionalis	31.69	2.00e-12	67.40
IUUC-Oni-082333	Oryza nivara	31.69	1.00e-12	67.80
IUUC-Opu-083952	Oryza punctata	32.39	2.00e-12	67.40
IUUC-Oru-085112	Oryza rufipogon	31.69	2.00e-12	67.40
IUUC-Osa-085615	Oryza sativa	31.69	6.00e-13	67.80
IUUC-Pop-099546	Populus trichocarpa	31.25	1.00e-10	61.20
IUUC-Ppe-101653	Prunus persica	31.08	3.00e-10	60.50
IUUC-Smo-109304	Selaginella moellendorffii	24.60	2.00e-22	100.00
IUUC-Sit-110049	Setaria italica	31.69	2.00e-12	66.60
IUUC-Sly-111516	Solanum lycopersicum	22.05	1.00e-12	68.20
IUUC-Stu-111982	Solanum tuberosum	23.65	1.00e-12	67.80
IUUC-Sbi-114887	Sorghum bicolor	31.47	9.00e-13	67.80
IUUC-Tca-121391	Theobroma cacao	32.88	2.00e-12	67.00
IUUC-Tae-123628	Triticum aestivum	32.91	6.00e-14	72.40
IUUC-Tur-125959	Triticum urartu	32.91	3.00e-14	72.80
IUUC-Tbe-127824	Tupaia belangeri	39.12	6.00e-90	324.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence