iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-015047

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

LOC100821163; BRADI_1g45727

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G45727	BRADI1G45727.1	BRADI1G45727.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	9.10e-09	36.3	164	206

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl++f  ++++++lp C H+fh dC+  w        ++ +CP+Cr
   Q: 164  CAVCLSEFddDEELRLLPkCSHAFHPDCIGEW------LAGHVTCPVCR 206
           ********77556*******************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MPTTNTKPSR HALALPLLLL LLIVAGAAAQ PNDWRDDRSD DDDDGRRQPP GPRARQPPPP 60
SFSTPMVVLL VALIAVFFFI GFFSIYIRQC GRGGASSGPA IPAAALLALS RQEQQQQQQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCGACGA CGAATACGAA GCCGAGCCGC CATGCGCTCG CGCTGCCGCT GCTTCTGCTC 60
CTCCTAATCG TGGCCGGCGC GGCCGCGCAG CCGAACGACT GGCGGGACGA CAGGAGCGAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0732--Signal
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100821163

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Lpe-050753	Leersia perrieri	57.49	8.00e-58	216.00
IUUC-Oba-075947	Oryza barthii	56.05	5.00e-45	174.00
IUUC-Ogl-077214	Oryza glaberrima	55.75	6.00e-50	190.00
IUUC-Ogu-078539	Oryza glumaepatula	55.17	2.00e-50	192.00
IUUC-Oin-079505	Oryza indica	55.30	1.00e-49	189.00
IUUC-Ome-081725	Oryza meridionalis	53.91	1.00e-49	189.00
IUUC-Oni-082370	Oryza nivara	54.89	3.00e-49	188.00
IUUC-Oru-084684	Oryza rufipogon	54.89	3.00e-49	188.00
IUUC-Osa-085939	Oryza sativa	55.94	3.00e-47	181.00
IUUC-Sit-109902	Setaria italica	52.45	9.00e-56	210.00
IUUC-Sbi-114050	Sorghum bicolor	52.71	1.00e-48	186.00
IUUC-Tae-123770	Triticum aestivum	65.16	4.00e-87	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence