iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113869

UUCD1 version

UUC-SoB-01495

Ensembl Protein ID

Sb10g008890.1

UniProt Accession

A0A194YIA5; A0A194YIA5_SORBI

Genbank Protein ID

KXG19704.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000769

Gene Name

SORBI_010G102000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g008890	Sb10g008890.1	Sb10g008890.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	2.50e-32	111.5	40	112

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vp++f+CpIsl+lMrdPv++p+Gitydr+s+e wla+g+  cPvt++pl+  dlvPn++ rr+iq+wc +n+ 
   Q: 40   VPAHFVCPISLDLMRDPVTAPTGITYDRESVEGWLARGNARCPVTGRPLRLADLVPNHATRRMIQDWCVANRA 112
           89******************************************************************99975 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSRAARAASR LVPEIPMLRR SSKQQQQASA AAEEEQEVAV PAHFVCPISL DLMRDPVTAP 60
TGITYDRESV EGWLARGNAR CPVTGRPLRL ADLVPNHATR RMIQDWCVAN RASGVQRVPT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCCGCG CAGCGAGGGC GGCGTCCAGG CTGGTGCCGG AGATACCCAT GCTGAGGCGG 60
AGCAGCAAGC AGCAGCAGCA GGCCTCCGCG GCGGCGGAGG AGGAGCAGGA GGTGGCGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014644	Brachypodium distachyon	74.72	4.00e-132	463.00
IUUC-Lpe-050701	Leersia perrieri	72.71	3.00e-126	444.00
IUUC-Oba-075106	Oryza barthii	75.00	1.00e-48	186.00
IUUC-Ogl-077061	Oryza glaberrima	73.52	6.00e-123	433.00
IUUC-Ogu-078268	Oryza glumaepatula	72.53	2.00e-122	431.00
IUUC-Oin-079382	Oryza indica	73.09	8.00e-123	432.00
IUUC-Oni-082958	Oryza nivara	72.53	1.00e-122	432.00
IUUC-Opu-083563	Oryza punctata	67.76	4.00e-97	347.00
IUUC-Osa-086217	Oryza sativa	72.75	8.00e-123	432.00
IUUC-Sit-109975	Setaria italica	83.08	8.00e-130	456.00
IUUC-Tae-124576	Triticum aestivum	77.64	4.00e-137	480.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence