iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114264

UUCD1 version

UUC-SoB-01442

Ensembl Protein ID

Sb10g021050.1

UniProt Accession

C5Z411; C5Z411_SORBI

Genbank Protein ID

EER88462.1; KXG20123.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000769; CM000769

Gene Name

SORBI_010G158100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb10g021050	Sb10g021050.1	Sb10g021050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	8.50e-07	30.2	186	228

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl  +  ++ ++ lp CgH fh +C+ kw       + + +CP+Cr
   Q: 186  CCVCLAGMreDQALRALPrCGHRFHDKCIGKW------LKAHPTCPVCR 228
           9*****9965334888889*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDLPWLDLPF TFLTLLLATR LAYDYYGDVA AAFAGGFSIQ VFLFYCFARW YRHAVAGRAG 60
DGAGGRDDPS PSARPQQQQQ GDADAPPVLT PLLGSSPDGG VRPSTLANRC FAVVFMVFVP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTTCTCCCT TCCTTCCATG GATTCCTCGC GCTGAGCGCG CTGCTGCTTT GCGGGTGATG 60
AGCGCGGCCT CGCCGGCGGC GCAGCGGCGA TGGACCTCCC GTGGCTGGAT CTGCCCTTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_10g021050

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001162	Aegilops tauschii	71.67	3.00e-20	88.20
IUUC-Bdi-014113	Brachypodium distachyon	62.11	9.00e-56	208.00
IUUC-Hvu-047384	Hordeum vulgare	64.81	6.00e-72	262.00
IUUC-Oba-075336	Oryza barthii	71.54	4.00e-35	139.00
IUUC-Ogl-077932	Oryza glaberrima	66.53	1.00e-51	195.00
IUUC-Ogu-078529	Oryza glumaepatula	68.22	7.00e-49	186.00
IUUC-Oin-079054	Oryza indica	69.16	5.00e-51	193.00
IUUC-Ome-081572	Oryza meridionalis	66.38	5.00e-49	186.00
IUUC-Oni-082857	Oryza nivara	69.16	5.00e-51	193.00
IUUC-Opu-084106	Oryza punctata	64.84	3.00e-47	180.00
IUUC-Oru-084573	Oryza rufipogon	69.16	1.00e-50	191.00
IUUC-Osa-086185	Oryza sativa	66.95	2.00e-51	194.00
IUUC-Sit-109824	Setaria italica	81.69	6.00e-65	239.00
IUUC-Tae-123948	Triticum aestivum	63.40	4.00e-67	246.00
IUUC-Tur-126186	Triticum urartu	70.07	4.00e-48	182.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence