iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098859

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTRDRAFT_1109660; POPTR_0001s15930g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s15930	POPTR_0001s15930.1	POPTR_0001s15930.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.00e-09	38.9	105	147

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           CaiCl df dg   +vlp C+H fhadC+ kw         + +CP+Cr
   Q: 105  CAICLADFTDGdkIRVLPkCNHRFHADCIDKW------LLSHSSCPTCR 147
           ********55444999999*************......888999****8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MAQISPSPTL SPTMSTPPCQ DQSQEPTMDF NVMVIVAAMI CALVCALGLN SMLQCVFQCT 60
RRAVTEPAEW ISSRRRNSGL KKKEMVALPT STYAHQGSPS SASGCAICLA DFTDGDKIRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTACAAAAA GCAAGGAAGA CAGTGGATTA TCAAGTAAGC ATAACCCATG TCCACAGTTC 60
ACCAATCATC TCAACACAAC CATCCACTGA GGCCTCTTGT TCCCTGGTGT GTTATGTACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0001s15930g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000811	Aegilops tauschii	59.34	6.00e-29	119.00
IUUC-Atr-002631	Amborella trichopoda	51.49	8.00e-36	142.00
IUUC-Bta-012478	Bos taurus	52.83	6.00e-14	72.40
IUUC-Gma-044104	Glycine max	63.35	4.00e-56	209.00
IUUC-Hvu-047379	Hordeum vulgare	55.00	3.00e-35	140.00
IUUC-Oba-075544	Oryza barthii	61.76	7.00e-37	145.00
IUUC-Ogl-077537	Oryza glaberrima	61.76	7.00e-37	145.00
IUUC-Ogu-078956	Oryza glumaepatula	60.78	3.00e-36	144.00
IUUC-Oin-079590	Oryza indica	61.76	1.00e-36	145.00
IUUC-Ome-081507	Oryza meridionalis	59.62	2.00e-34	138.00
IUUC-Oni-082676	Oryza nivara	61.76	7.00e-37	145.00
IUUC-Opu-083545	Oryza punctata	60.22	4.00e-32	130.00
IUUC-Oru-084832	Oryza rufipogon	61.76	1.00e-36	145.00
IUUC-Osa-086155	Oryza sativa	61.76	1.00e-36	145.00
IUUC-Oar-090197	Ovis aries	52.83	3.00e-14	73.20
IUUC-Ppe-101304	Prunus persica	70.59	2.00e-56	210.00
IUUC-Stu-112500	Solanum tuberosum	55.17	4.00e-40	156.00
IUUC-Sbi-114355	Sorghum bicolor	60.00	3.00e-40	157.00
IUUC-Tca-121005	Theobroma cacao	82.31	1.00e-60	225.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence