iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099990

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000350

Gene Name

POPTRDRAFT_774857; POPTR_0014s13130g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0014s13130	POPTR_0014s13130.1	POPTR_0014s13130.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-22	77.9	176	212
UBD/Beta-Prp	7.10e-40	138.1	53	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtc..lafsd.tllvsGsdDgtikvWDlrtgv 34
           gH d v+c  ++ +d  ++v+Gs+D+t+k+WD+r ++
   Q: 176  GHRDYVRCgdCSPTDgEMFVTGSYDHTVKLWDVRVDN 212
           8*******55555778****************99776 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           s i +++fsp +++ +++  ++++++++ +t +  +++s+ ++ vt+++f  dg++++ +   ++i+v+d++t+++++ l+ h + v+ ++
   Q: 53   SSIPSIDFSPISPHHFAAANSASLTLFSPHTLSPASTISS-SDVVTSCSFRCDGSLIAASDLSGLIRVFDVKTRTPLRRLRSHARPVRFVK 142
           6677899******9999**************888666655.559**********999999999**************************** PP
   S: 102  fsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfds 190
           +   ++ +lvsG++d++++ wd+  ++++   l gh++ v+c   +p++  ++v+Gs+D tv+lWd++ ++     + +h ++v+ ++f +
   Q: 143  YPLlDKLHLVSGGDDSVVKYWDVAGESVVL-DLYGHRDYVRCGDCSPTDgEMFVTGSYDHTVKLWDVRVDNKESVIEVNHGNPVEDVIFLP 232
           *997889***********************.9***********************************999999999999************ PP
   S: 191  ngkelvsgsldgtvklwdlq.tgecvrtlnghtdnvksv 228
           +g  +v+ +  ++vk+wdl   g++v++++ h+++v+s+
   Q: 233  SG-GMVATAGGNSVKIWDLIgGGKMVYSMESHNKTVTSI 270
           87.888889999******98899*************998 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MADLLVEQPQ EITISKTFPT KPKLKSKPKT PSKTPESKYW SSFKSHQISN LISSIPSIDF 60
SPISPHHFAA ANSASLTLFS PHTLSPASTI SSSDVVTSCS FRCDGSLIAA SDLSGLIRVF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCAGACC TTCTTGTAGA ACAACCCCAA GAAATCACCA TCTCCAAAAC CTTCCCAACT 60
AAACCAAAGC TAAAATCCAA ACCGAAAACC CCATCAAAAA CCCCTGAATC CAAATACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR018983--U3_snoRNA-assocProt_15_C
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF09384--UTP15_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

pop:POPTR_0014s13130g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003068	Amborella trichopoda	51.15	2.00e-120	425.00
IUUC-Aly-005525	Arabidopsis lyrata	64.88	0.00e+00	654.00
IUUC-Ath-006954	Arabidopsis thaliana	64.18	0.00e+00	644.00
IUUC-Afl-008504	Aspergillus flavus	27.52	4.00e-44	172.00
IUUC-Ani-009315	Aspergillus nidulans	26.13	1.00e-34	140.00
IUUC-Aor-010181	Aspergillus oryzae	27.52	4.00e-44	172.00
IUUC-Ate-010498	Aspergillus terreus	27.06	2.00e-42	167.00
IUUC-Bgr-012273	Blumeria graminis	27.62	1.00e-46	180.00
IUUC-Bci-013930	Botrytis cinerea	29.52	1.00e-49	190.00
IUUC-Bdi-014876	Brachypodium distachyon	50.00	6.00e-131	460.00
IUUC-Bol-015366	Brassica oleracea	63.29	8.00e-177	612.00
IUUC-Bra-017589	Brassica rapa	62.02	2.00e-172	598.00
IUUC-Cel-018159	Caenorhabditis elegans	25.38	2.00e-39	156.00
IUUC-Cne-026945	Cryptococcus neoformans	30.06	4.00e-47	182.00
IUUC-Dse-031495	Dothistroma septosporum	26.40	2.00e-32	133.00
IUUC-Lpe-051141	Leersia perrieri	47.89	2.00e-127	449.00
IUUC-Lma-053083	Leptosphaeria maculans	32.89	3.00e-41	162.00
IUUC-Mor-057186	Magnaporthe oryzae	32.81	1.00e-37	150.00
IUUC-Mtr-058346	Medicago truncatula	66.04	0.00e+00	668.00
IUUC-Mvi-060272	Microbotryum violaceum	29.55	1.00e-54	207.00
IUUC-Mac-065330	Musa acuminata	58.10	3.00e-121	428.00
IUUC-Nfi-068589	Neosartorya fischeri	28.31	2.00e-32	133.00
IUUC-Obr-076038	Oryza brachyantha	48.50	3.00e-126	444.00
IUUC-Ogl-077463	Oryza glaberrima	48.65	2.00e-127	448.00
IUUC-Ogu-078631	Oryza glumaepatula	49.04	3.00e-129	454.00
IUUC-Oin-079242	Oryza indica	48.85	4.00e-128	451.00
IUUC-Olo-080652	Oryza longistaminata	47.79	3.00e-122	431.00
IUUC-Ome-081109	Oryza meridionalis	48.20	7.00e-122	431.00
IUUC-Oni-082187	Oryza nivara	48.85	4.00e-128	451.00
IUUC-Opu-083995	Oryza punctata	48.14	4.00e-125	441.00
IUUC-Oru-084962	Oryza rufipogon	48.10	3.00e-120	424.00
IUUC-Osa-086201	Oryza sativa	48.10	3.00e-120	424.00
IUUC-Olu-087842	Ostreococcus lucimarinus	31.78	2.00e-63	236.00
IUUC-Ppe-101318	Prunus persica	76.10	0.00e+00	788.00
IUUC-Pgr-103329	Puccinia graminis	27.86	2.00e-55	209.00
IUUC-Ptt-103837	Puccinia triticina	26.90	5.00e-54	205.00
IUUC-Pte-104133	Pyrenophora teres	33.99	6.00e-45	174.00
IUUC-Pyt-104675	Pyrenophora triticirepentis	33.99	1.00e-44	174.00
IUUC-Ssl-108534	Sclerotinia sclerotiorum	29.34	7.00e-50	191.00
IUUC-Sit-110043	Setaria italica	46.31	6.00e-116	410.00
IUUC-Stu-112396	Solanum tuberosum	67.11	0.00e+00	696.00
IUUC-Tca-121842	Theobroma cacao	77.96	0.00e+00	781.00
IUUC-Tre-122172	Trichoderma reesei	33.44	2.00e-43	169.00
IUUC-Tae-125722	Triticum aestivum	49.07	2.00e-116	412.00
IUUC-Tur-126846	Triticum urartu	45.15	4.00e-69	254.00
IUUC-Vda-129696	Verticillium dahliae	31.95	9.00e-43	167.00
IUUC-Vvi-131126	Vitis vinifera	73.96	0.00e+00	760.00
IUUC-Yli-134432	Yarrowia lipolytica	30.02	4.00e-49	188.00
IUUC-Zma-135241	Zea mays	49.71	1.00e-126	446.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence