iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G28060	BRADI1G28060.1	BRADI1G28060.1
BRADI1G28060	BRADI1G28060.2	BRADI1G28060.2
BRADI1G28060	BRADI1G28060.3	BRADI1G28060.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.10e-06	29.5	197	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdg.plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df  + + ++ lp C H+fh  C+  w       +++++CPlCr
   Q: 197  CSVCLQDFgsR-QfVRALPqCHHIFHVRCIDSW------LQRNASCPLCR 239
           ********643.24888999*************......**********8 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDHWEPSSSS SSSATAASSS NPRCRFDAVW RACGRCGAVA VEAAGWALGA LLTCVFALVG 60
SLVGIFIGAC MGMSTESGMF RGAGVGAVSG AVFSIEAVES CIEIWRSSES GKYSILFVLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATCATT GGGAGCCTTC TTCTTCTTCT TCTTCTAGCG CGACAGCCGC TTCTTCTTCC 60
AATCCCCGCT GCCGCTTCGA TGCCGTGTGG AGGGCGTGCG GGCGGTGCGG CGCCGTGGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

bdi:100829882

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Hvu-047717	Hordeum vulgare	88.20	1.00e-81	294.00
IUUC-Lpe-050990	Leersia perrieri	84.51	2.00e-95	340.00
IUUC-Oba-075172	Oryza barthii	83.63	4.00e-94	336.00
IUUC-Obr-076253	Oryza brachyantha	87.96	2.00e-88	317.00
IUUC-Ogl-077372	Oryza glaberrima	83.63	4.00e-94	336.00
IUUC-Ogu-078405	Oryza glumaepatula	83.63	6.00e-94	335.00
IUUC-Oin-079516	Oryza indica	83.63	4.00e-94	336.00
IUUC-Olo-081046	Oryza longistaminata	85.79	6.00e-82	296.00
IUUC-Ome-081409	Oryza meridionalis	82.27	2.00e-87	314.00
IUUC-Oni-082998	Oryza nivara	83.63	4.00e-94	336.00
IUUC-Opu-083188	Oryza punctata	84.07	5.00e-95	339.00
IUUC-Oru-085074	Oryza rufipogon	83.63	4.00e-94	336.00
IUUC-Osa-086207	Oryza sativa	83.19	4.00e-94	336.00
IUUC-Olu-087632	Ostreococcus lucimarinus	35.29	4.00e-11	59.70
IUUC-Pca-100704	Procavia capensis	41.98	2.00e-14	73.60
IUUC-Sit-110003	Setaria italica	86.03	4.00e-82	296.00
IUUC-Sly-111606	Solanum lycopersicum	39.18	9.00e-29	119.00
IUUC-Sbi-114876	Sorghum bicolor	86.40	5.00e-94	336.00
IUUC-Tae-122768	Triticum aestivum	87.22	7.00e-94	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence