iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017423

Ensembl Protein ID

Bra027422.1-P

UniProt Accession

M4EF60; M4EF60_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra027422	Bra027422.1	Bra027422.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	4.40e-42	144.1	41	175

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekWspal 96
           R+++e++el+ dpp+++sa+p+ + +l++w ++i+Gp++tpYegg+F l++ fp+dYPfkPPkv f t+i+h+nv+++G++ ++il+  + Wspal
   Q: 41   RIQREMAELNVDPPPECSAGPKGD-NLYHWIATIIGPSGTPYEGGIFFLDMIFPSDYPFKPPKVVFKTRIYHCNVDTAGNLSVEILR--DSWSPAL 133
           99**********************.9************************************************************9..******* PP
   S: 97   svesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++++vl +i s++ +p++ +p+   +a+l+ ++re++++ ++
   Q: 134  TITKVLQAIRSIFLKPETYNPALPVIARLYLSDREKHEEVAK 175
           ************************************999876 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MMTTPGGSGR FKPLPTAMYA GYSGTASSWV AKTSVSASGK RIQREMAELN VDPPPECSAG 60
PKGDNLYHWI ATIIGPSGTP YEGGIFFLDM IFPSDYPFKP PKVVFKTRIY HCNVDTAGNL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATGACAA CACCAGGCGG AAGCGGGAGA TTTAAGCCGT TACCGACGGC GATGTACGCC 60
GGATACTCAG GAACGGCGTC GTCTTGGGTA GCGAAGACAT CGGTTTCCGC GTCTGGGAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000608--UBQ-conjugat_E2
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005634--C:nucleus
GO:0010099--P:regulation of photomorphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000463	Aegilops tauschii	68.75	3.00e-60	226.00
IUUC-Aly-005950	Arabidopsis lyrata	92.86	6.00e-100	355.00
IUUC-Ath-006621	Arabidopsis thaliana	92.86	3.00e-100	356.00
IUUC-Bdi-014747	Brachypodium distachyon	68.06	3.00e-59	220.00
IUUC-Bol-015173	Brassica oleracea	98.36	1.00e-105	374.00
IUUC-Cre-022791	Chlamydomonas reinhardtii	58.28	1.00e-55	208.00
IUUC-Cin-025161	Ciona intestinalis	50.64	1.00e-47	182.00
IUUC-Gma-043921	Glycine max	72.41	3.00e-61	227.00
IUUC-Ggo-045068	Gorilla gorilla	55.63	7.00e-49	186.00
IUUC-Lpe-051111	Leersia perrieri	66.43	1.00e-57	217.00
IUUC-Mtr-058214	Medicago truncatula	67.60	4.00e-70	256.00
IUUC-Mac-065206	Musa acuminata	69.06	9.00e-58	214.00
IUUC-Oba-075804	Oryza barthii	70.08	2.00e-55	209.00
IUUC-Obr-076634	Oryza brachyantha	55.95	2.00e-52	197.00
IUUC-Ogl-077145	Oryza glaberrima	68.06	2.00e-59	221.00
IUUC-Oin-080066	Oryza indica	57.65	2.00e-55	208.00
IUUC-Opu-083227	Oryza punctata	67.86	2.00e-58	219.00
IUUC-Osa-086202	Oryza sativa	67.36	6.00e-59	219.00
IUUC-Pop-099024	Populus trichocarpa	81.25	1.00e-70	258.00
IUUC-Ppe-101314	Prunus persica	77.93	1.00e-68	251.00
IUUC-Smo-108957	Selaginella moellendorffii	61.69	3.00e-57	213.00
IUUC-Sit-109845	Setaria italica	64.58	3.00e-56	210.00
IUUC-Sly-111200	Solanum lycopersicum	72.22	5.00e-64	236.00
IUUC-Sbi-114236	Sorghum bicolor	62.50	2.00e-55	207.00
IUUC-Tca-121777	Theobroma cacao	80.00	9.00e-69	252.00
IUUC-Tae-123791	Triticum aestivum	68.06	6.00e-59	219.00
IUUC-Vvi-131190	Vitis vinifera	79.35	1.00e-73	268.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence