iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114852

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000766

Gene Name

SORBI_007G046400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb07g003830	Sb07g003830.1	Sb07g003830.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-08	35.9	120	163

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgpl.vlpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl  +    + ++ +++C H+fh+ C+ kw     + +++++CPlCr
   Q: 120  CAVCLGALearHR-VReLGNCAHAFHKACIDKW-----VDKGQATCPLCR 163
           ******9943322.443466*************.....89*********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MGFPSVCYCV ILPQPLILVL QLLDFLRHAV LLCLSSLGLA ASPAADDHPA YYAAPPAPAD 60
LWALQPSSSS LLLLQAGAAP LQEAPTPAAI KARLPAVRYA DLLRSRRASA SPPAPVPAVC 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTGTTGAGTC CTTCTCTCTT ATATATAGAC CCCACACCAC CCTCCCTCTT CTTCCTCCTC 60
CTCCTCCCCC ATTATCTCTC CTCTCTCTCT CTCTCTCTCT AGCTCATTCT ACCATTTCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0732--Signal

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_07g003830

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000683	Aegilops tauschii	91.30	3.00e-21	91.70
IUUC-Atr-002993	Amborella trichopoda	47.06	1.00e-17	81.30
IUUC-Bdi-014912	Brachypodium distachyon	73.08	6.00e-31	125.00
IUUC-Hvu-047283	Hordeum vulgare	72.99	1.00e-43	167.00
IUUC-Lpe-051391	Leersia perrieri	57.95	7.00e-32	129.00
IUUC-Mac-065331	Musa acuminata	49.14	2.00e-33	133.00
IUUC-Ogl-077836	Oryza glaberrima	67.05	1.00e-28	118.00
IUUC-Oin-079047	Oryza indica	66.08	2.00e-26	110.00
IUUC-Olo-080459	Oryza longistaminata	41.05	6.00e-11	59.30
IUUC-Ome-081408	Oryza meridionalis	68.42	1.00e-28	118.00
IUUC-Oni-082115	Oryza nivara	66.08	2.00e-26	110.00
IUUC-Opu-084056	Oryza punctata	68.64	1.00e-28	118.00
IUUC-Oru-084488	Oryza rufipogon	66.67	2.00e-27	114.00
IUUC-Osa-086031	Oryza sativa	66.67	2.00e-27	114.00
IUUC-Pop-098965	Populus trichocarpa	40.70	5.00e-17	79.70
IUUC-Ppe-101647	Prunus persica	37.04	2.00e-19	87.40
IUUC-Sly-110963	Solanum lycopersicum	43.21	1.00e-17	81.60
IUUC-Stu-112411	Solanum tuberosum	43.21	1.00e-17	81.30
IUUC-Tae-123460	Triticum aestivum	67.82	2.00e-31	127.00
IUUC-Tur-126344	Triticum urartu	100.00	2.00e-25	105.00
IUUC-Vvi-131690	Vitis vinifera	64.00	1.00e-14	71.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence