iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppa-095814

Ensembl Protein ID

PP1S316_34V6.1

UniProt Accession

A9TTP4; A9TTP4_PHYPA

Genbank Protein ID

EDQ53213.1

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545205

Gene Name

PHYPADRAFT_150439

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S316_34V6	PP1S316_34V6.1	PP1S316_34V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-19	67.6	456	492
UBD/Beta-Prp	2.20e-50	172.3	422	672

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtgv 34
           H ++v++laf  ++  l +++++dD+tikvWD  tg+
   Q: 456  HVGGVNDLAFshPNkQLcVITCGDDKTIKVWDAATGR 492
           999*******99764334699***********99887 PP

UBD/Beta-Prp

   S: 20   pdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sgd 107
           pd++ll +++  + + ++ +  g+ lr+      h ++v+++ fs+  k    +t+++D+tikvwd  tg   +t++ghe+ v+s+  +   s +
   Q: 422  PDGTLLGVAFSKHIVHIYAYNGGSDLRQHleiDAHVGGVNDLAFSHPNKqlCVITCGDDKTIKVWDAATGRKQYTFEGHEAPVYSVCPHHkeSIQ 516
           899999999999999******9998654323389***********99888999********************************888776555* PP
   S: 108  klvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrt....vrlWdlktgkllrtltgghtdsvyslsfdsngkelvsg 198
           ++ s+  d  i+ w  +      +  +   ++ ++++++ dg  l+s+++ +     +  W+ + g + rt +g  ++s   ++fd ++++++++
   Q: 517  FIFSTAIDGKIKAWLYDLLGSRVDY-DAPGHWCTTMAYSADGTRLFSCGTSKDgesyLVEWNESEGAIKRTYSGFRKRSAGVVQFDTTRNRFLAA 610
           *************865554444434.4556699999999999999999765441122333777999***************************** PP
   S: 199  sldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriWdlrsgdllktl 260
           ++   +k+wd+ +++ + t  +    + s  +rf +++ +l++++sD+ i+i    ++d +++l
   Q: 611  GDEFLIKFWDMDNTNLLTTIDAEGGLPASprLRFNKDGSLLAVTTSDNGIKIL--ANRDGMQML 672
           *********************99988876336677*****************4..444444444 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDQVQGGEW EEVERYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKQDR AKAVDILVKD LKVFSSFNEE LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTCCT TGAGTAGGGA ACTTGTGTTC CTGATCTTGC AGTTCCTTGA TGAAGAAAAG 60
TTCAAGGAAA CAGTGCACAA GTAAGTCCGC CCTTCTCATT TTTTCGATTT CCACCCCAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

ppp:PHYPADRAFT_150439

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000215	Aegilops tauschii	70.55	0.00e+00	1631.00
IUUC-Atr-002737	Amborella trichopoda	73.95	0.00e+00	1617.00
IUUC-Aly-005472	Arabidopsis lyrata	68.38	0.00e+00	1542.00
IUUC-Ath-007021	Arabidopsis thaliana	68.95	0.00e+00	1571.00
IUUC-Bdi-014941	Brachypodium distachyon	70.54	0.00e+00	1611.00
IUUC-Gma-044036	Glycine max	70.35	0.00e+00	1603.00
IUUC-Hvu-047688	Hordeum vulgare	69.34	0.00e+00	1496.00
IUUC-Lpe-051683	Leersia perrieri	72.08	0.00e+00	1652.00
IUUC-Mtr-058037	Medicago truncatula	70.96	0.00e+00	1575.00
IUUC-Oba-075179	Oryza barthii	71.38	0.00e+00	1652.00
IUUC-Obr-076730	Oryza brachyantha	71.79	0.00e+00	1648.00
IUUC-Ogl-076958	Oryza glaberrima	72.16	0.00e+00	1694.00
IUUC-Ogu-078424	Oryza glumaepatula	71.38	0.00e+00	1652.00
IUUC-Oin-079972	Oryza indica	71.55	0.00e+00	1662.00
IUUC-Olo-080979	Oryza longistaminata	71.99	0.00e+00	1654.00
IUUC-Ome-081212	Oryza meridionalis	71.90	0.00e+00	1643.00
IUUC-Oni-082820	Oryza nivara	71.38	0.00e+00	1652.00
IUUC-Opu-083223	Oryza punctata	70.13	0.00e+00	1592.00
IUUC-Oru-084418	Oryza rufipogon	70.35	0.00e+00	1649.00
IUUC-Osa-086275	Oryza sativa	71.55	0.00e+00	1662.00
IUUC-Pop-098876	Populus trichocarpa	69.09	0.00e+00	1569.00
IUUC-Ppe-101370	Prunus persica	71.15	0.00e+00	1626.00
IUUC-Sit-110121	Setaria italica	71.32	0.00e+00	1629.00
IUUC-Stu-112409	Solanum tuberosum	66.18	0.00e+00	1484.00
IUUC-Sbi-114078	Sorghum bicolor	69.25	0.00e+00	1547.00
IUUC-Tca-121628	Theobroma cacao	69.29	0.00e+00	1588.00
IUUC-Tae-125673	Triticum aestivum	70.55	0.00e+00	1631.00
IUUC-Tur-126718	Triticum urartu	69.92	0.00e+00	1604.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence