iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131344

UUCD1 version

UUC-ViV-00255

Ensembl Protein ID

VIT_01s0026g00190.t01

UniProt Accession

D7TNR3; D7TNR3_VITVI

Genbank Protein ID

CBI32136.3

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

FN596002

Gene Name

VIT_01s0026g00190

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_01s0026g00190	VIT_01s0026g00190.t01	VIT_01s0026g00190.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	3.80e-28	97.9	277	348

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           p++f+CpI+lelM+dPv++++G+ty+rssI kw++ g+  cP+t++++ + d+vPn +l+rliq++c++n++
   Q: 277  PDDFRCPITLELMTDPVTIETGHTYERSSILKWFRAGNPICPKTGEKVVSMDVVPNMALQRLIQQYCSANGI 348
           89******************************************************************9986 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MTHKIHASPR RILTFPAVHP CDAVAPATLL ASLVNLATTI CGYKSKFFAA NKRNTRELIR 60
QIGILLVFLE EILDRRLDLP ASAVLSFSEL HVTLQKIVYL LEDCSFGGAR LLMLMKSERV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCACA AAATTCACGC CTCCCCTCGC CGGATACTCA CATTTCCGGC GGTTCATCCC 60
TGCGATGCCG TTGCCCCGGC GACGCTTCTC GCCTCTCTGG TCAATCTTGC TACCACCATT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

vvi:100243339

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002640	Amborella trichopoda	40.18	3.00e-119	421.00
IUUC-Aly-006337	Arabidopsis lyrata	44.41	2.00e-161	561.00
IUUC-Ath-007598	Arabidopsis thaliana	45.04	3.00e-158	551.00
IUUC-Bol-015964	Brassica oleracea	44.67	2.00e-155	541.00
IUUC-Bra-017789	Brassica rapa	44.46	2.00e-148	518.00
IUUC-Cne-026806	Cryptococcus neoformans	34.25	1.00e-04	40.00
IUUC-Gma-043325	Glycine max	53.76	0.00e+00	652.00
IUUC-Mtr-058256	Medicago truncatula	57.02	0.00e+00	716.00
IUUC-Ogl-077133	Oryza glaberrima	39.77	2.00e-109	389.00
IUUC-Ogu-078633	Oryza glumaepatula	39.13	3.00e-109	388.00
IUUC-Oin-079248	Oryza indica	39.13	4.00e-109	387.00
IUUC-Ome-081678	Oryza meridionalis	39.31	2.00e-111	395.00
IUUC-Oni-082545	Oryza nivara	39.10	5.00e-110	390.00
IUUC-Opu-083981	Oryza punctata	40.30	3.00e-119	421.00
IUUC-Oru-084317	Oryza rufipogon	38.82	5.00e-104	370.00
IUUC-Osa-085294	Oryza sativa	41.56	1.00e-98	353.00
IUUC-Sly-111130	Solanum lycopersicum	57.96	0.00e+00	768.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence