iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053880

Ensembl Protein ID

ENSLAFP00000005299.3

UniProt Accession

G3SXY3; G3SXY3_LOXAF

Protein Name

Uncharacterized protein

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000006312.3	ENSLAFT00000006314.3	ENSLAFP00000005299.3
ENSLAFG00000006312.3	ENSLAFT00000033921.1	ENSLAFP00000021535.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-14	53.7	119	152

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H+d+vtc+ +  +d++++sGs  g i + +++t+
   Q: 119  HKDEVTCVTYnwNDCYVASGSLSGEIILHSVTTN 152
           ********887799************99998876 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MQENLRFASS GDDIKIWDAS SMTLVDKFNP HTSPHGVSSM CWSSNNNFLV TASSSGDKIV 60
VSSCKCKPVP LLELAEGQKQ TCVNLNSTSM YLVSGDGISQ LFRSWSLNVS LFFLSFKDHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGGAAA ACCTCAGATT TGCTTCATCA GGAGATGATA TTAAAATATG GGATGCTTCA 60
TCTATGACAT TGGTGGATAA ATTCAACCCA CACACATCAC CACATGGAGT CAGCTCAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	34.00	3.00e-14	74.30
IUUC-Aml-002397	Ailuropoda melanoleuca	88.05	0.00e+00	1155.00
IUUC-Atr-002464	Amborella trichopoda	31.11	1.00e-35	144.00
IUUC-Apl-003870	Anas platyrhynchos	63.02	0.00e+00	822.00
IUUC-Aca-004925	Anolis carolinensis	60.62	0.00e+00	758.00
IUUC-Aly-005931	Arabidopsis lyrata	31.63	1.00e-37	151.00
IUUC-Ath-006681	Arabidopsis thaliana	31.53	4.00e-37	149.00
IUUC-Ame-010906	Astyanax mexicanus	43.66	2.00e-141	496.00
IUUC-Bta-013389	Bos taurus	87.44	0.00e+00	1147.00
IUUC-Bdi-014340	Brachypodium distachyon	28.71	1.00e-33	138.00
IUUC-Bol-016282	Brassica oleracea	30.35	2.00e-36	147.00
IUUC-Bra-017178	Brassica rapa	30.35	3.00e-36	147.00
IUUC-Cja-019541	Callithrix jacchus	87.75	0.00e+00	1172.00
IUUC-Cfa-021218	Canis familiaris	87.29	0.00e+00	1141.00
IUUC-Cpo-021697	Cavia porcellus	80.82	0.00e+00	1072.00
IUUC-Csa-023620	Chlorocebus sabaeus	87.75	0.00e+00	1182.00
IUUC-Cho-025105	Choloepus hoffmanni	86.95	0.00e+00	945.00
IUUC-Cin-025293	Ciona intestinalis	40.67	4.00e-59	222.00
IUUC-Csv-026234	Ciona savignyi	35.74	8.00e-46	176.00
IUUC-Dre-028251	Danio rerio	41.48	4.00e-127	448.00
IUUC-Dno-029281	Dasypus novemcinctus	87.66	0.00e+00	957.00
IUUC-Dor-031020	Dipodomys ordii	74.52	3.00e-171	595.00
IUUC-Ete-033113	Echinops telfairi	83.89	0.00e+00	661.00
IUUC-Eca-034230	Equus caballus	87.92	0.00e+00	1140.00
IUUC-Eeu-034671	Erinaceus europaeus	70.66	0.00e+00	744.00
IUUC-Fca-035775	Felis catus	88.80	0.00e+00	1175.00
IUUC-Fal-037557	Ficedula albicollis	60.41	0.00e+00	741.00
IUUC-Gmo-038586	Gadus morhua	53.25	3.00e-93	335.00
IUUC-Gga-040153	Gallus gallus	62.48	0.00e+00	819.00
IUUC-Gac-041385	Gasterosteus aculeatus	41.89	6.00e-126	444.00
IUUC-Gma-043049	Glycine max	31.88	4.00e-38	152.00
IUUC-Ggo-044576	Gorilla gorilla	88.35	0.00e+00	1208.00
IUUC-Hsa-046198	Homo sapiens	88.20	0.00e+00	1206.00
IUUC-Hvu-047794	Hordeum vulgare	33.63	1.00e-13	68.60
IUUC-Lch-050561	Latimeria chalumnae	49.55	4.00e-153	535.00
IUUC-Lpe-051469	Leersia perrieri	31.97	1.00e-32	134.00
IUUC-Loc-052816	Lepisosteus oculatus	46.86	6.00e-146	511.00
IUUC-Mcc-054977	Macaca mulatta	87.59	0.00e+00	1179.00
IUUC-Meu-056141	Macropus eugenii	61.24	2.00e-169	589.00
IUUC-Mtr-058441	Medicago truncatula	31.79	4.00e-37	149.00
IUUC-Mga-060141	Meleagris gallopavo	61.11	0.00e+00	788.00
IUUC-Mmr-061201	Microcebus murinus	87.90	0.00e+00	1191.00
IUUC-Mdo-061855	Monodelphis domestica	73.21	0.00e+00	942.00
IUUC-Mmu-064342	Mus musculus	82.15	0.00e+00	1093.00
IUUC-Mac-065368	Musa acuminata	27.52	2.00e-33	138.00
IUUC-Mpu-066191	Mustela putorius furo	87.75	0.00e+00	1152.00
IUUC-Mlu-067310	Myotis lucifugus	85.93	0.00e+00	1113.00
IUUC-Nle-069990	Nomascus leucogenys	88.35	0.00e+00	1210.00
IUUC-Opr-070336	Ochotona princeps	79.43	0.00e+00	1003.00
IUUC-Ont-071675	Oreochromis niloticus	43.45	7.00e-134	471.00
IUUC-Oan-072772	Ornithorhynchus anatinus	69.63	0.00e+00	759.00
IUUC-Ocu-074095	Oryctolagus cuniculus	87.90	0.00e+00	1164.00
IUUC-Oba-075327	Oryza barthii	29.60	6.00e-34	139.00
IUUC-Obr-076119	Oryza brachyantha	29.68	1.00e-34	141.00
IUUC-Ogl-077820	Oryza glaberrima	29.31	4.00e-33	136.00
IUUC-Ogu-078679	Oryza glumaepatula	29.82	1.00e-33	138.00
IUUC-Oin-079891	Oryza indica	29.61	5.00e-34	139.00
IUUC-Olo-080414	Oryza longistaminata	31.97	7.00e-33	135.00
IUUC-Ome-081888	Oryza meridionalis	29.91	6.00e-34	139.00
IUUC-Oni-082417	Oryza nivara	29.61	7.00e-34	139.00
IUUC-Opu-083393	Oryza punctata	28.14	7.00e-34	139.00
IUUC-Oru-084698	Oryza rufipogon	29.61	4.00e-34	140.00
IUUC-Osa-086121	Oryza sativa	29.61	7.00e-34	139.00
IUUC-Ola-086806	Oryzias latipes	40.14	3.00e-131	462.00
IUUC-Oga-088622	Otolemur garnettii	87.18	0.00e+00	1164.00
IUUC-Oar-090391	Ovis aries	85.37	0.00e+00	988.00
IUUC-Ptr-091036	Pan troglodytes	88.05	0.00e+00	1206.00
IUUC-Pan-092576	Papio anubis	87.90	0.00e+00	1184.00
IUUC-Psi-093450	Pelodiscus sinensis	66.47	0.00e+00	840.00
IUUC-Pma-094101	Petromyzon marinus	52.23	1.00e-96	345.00
IUUC-Ppa-095262	Physcomitrella patens	31.83	2.00e-37	150.00
IUUC-Pfo-097142	Poecilia formosa	41.75	2.00e-132	466.00
IUUC-Pab-097829	Pongo abelii	88.20	0.00e+00	1204.00
IUUC-Pop-099687	Populus trichocarpa	31.33	2.00e-36	147.00
IUUC-Pca-100217	Procavia capensis	83.65	0.00e+00	679.00
IUUC-Ppe-101502	Prunus persica	31.31	8.00e-37	148.00
IUUC-Pva-102736	Pteropus vampyrus	86.23	0.00e+00	1147.00
IUUC-Rno-104977	Rattus norvegicus	82.15	0.00e+00	1046.00
IUUC-Sha-107003	Sarcophilus harrisii	70.98	0.00e+00	931.00
IUUC-Smo-109216	Selaginella moellendorffii	33.33	6.00e-36	144.00
IUUC-Sit-109796	Setaria italica	29.58	3.00e-33	137.00
IUUC-Sly-110941	Solanum lycopersicum	29.47	8.00e-34	138.00
IUUC-Stu-112314	Solanum tuberosum	29.78	4.00e-34	139.00
IUUC-Sar-112926	Sorex araneus	78.82	0.00e+00	1041.00
IUUC-Sbi-113822	Sorghum bicolor	33.71	3.00e-28	119.00
IUUC-Ssc-116242	Sus scrofa	87.43	2.00e-178	618.00
IUUC-Tgu-116765	Taeniopygia guttata	61.03	0.00e+00	763.00
IUUC-Tru-117738	Takifugu rubripes	41.44	4.00e-140	491.00
IUUC-Tsy-118856	Tarsius syrichta	82.63	0.00e+00	1031.00
IUUC-Tni-120871	Tetraodon nigroviridis	42.24	6.00e-144	504.00
IUUC-Tca-120965	Theobroma cacao	30.70	2.00e-35	144.00
IUUC-Tae-124830	Triticum aestivum	29.32	1.00e-34	141.00
IUUC-Tur-126840	Triticum urartu	28.66	2.00e-34	140.00
IUUC-Ttr-128551	Tursiops truncatus	85.93	0.00e+00	1120.00
IUUC-Vpa-130324	Vicugna pacos	88.20	0.00e+00	1136.00
IUUC-Vvi-131699	Vitis vinifera	31.33	2.00e-36	147.00
IUUC-Xtr-131956	Xenopus tropicalis	58.31	0.00e+00	771.00
IUUC-Xma-132982	Xiphophorus maculatus	40.03	4.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence