iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099784

Ensembl Protein ID

POPTR_0009s14100.1

UniProt Accession

B9HR20; B9HR20_POPTR

Genbank Protein ID

EEE86895.1

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_821071; POPTR_0009s14100g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s14100	POPTR_0009s14100.1	POPTR_0009s14100.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.30e-21	76.1	53	88

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           H++ v+ l+f s+ + l+sGsdD  + +WD+ tg++
   Q: 53   HEGCVNTLSFnSGgDVLISGSDDLRVILWDWETGRV 88
           99********97789******************987 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MMKKRSRTDL DQAVVNVCKR ELGQLSTRDF AHRLAASEDL VLRLEIHKKL EKHEGCVNTL 60
SFNSGGDVLI SGSDDLRVIL WDWETGRVKL SFNSGHRNNV FQAKFMPFSD DRTIVTCAAD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATACTGTAA CCGATTCTCC TCTCTCTCTC TCTCTTAAAG AGAAAACCAG AACTTCCAGG 60
ATTCCACTCG ACTCGACCCG TCCTGATTCA CCCAGCCGTC AACTCACCAA TCGAACTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

pop:POPTR_0009s14100g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	57.31	2.00e-137	481.00
IUUC-Aml-001810	Ailuropoda melanoleuca	41.47	1.00e-76	280.00
IUUC-Atr-002714	Amborella trichopoda	58.94	9.00e-143	499.00
IUUC-Apl-003181	Anas platyrhynchos	33.21	1.00e-35	144.00
IUUC-Aca-004853	Anolis carolinensis	41.19	7.00e-70	258.00
IUUC-Aly-005505	Arabidopsis lyrata	63.58	5.00e-170	590.00
IUUC-Ath-007629	Arabidopsis thaliana	65.65	1.00e-155	542.00
IUUC-Ame-011615	Astyanax mexicanus	42.93	1.00e-83	303.00
IUUC-Bta-013549	Bos taurus	41.71	1.00e-76	280.00
IUUC-Bdi-014538	Brachypodium distachyon	59.81	6.00e-147	513.00
IUUC-Bol-015797	Brassica oleracea	63.86	3.00e-166	577.00
IUUC-Bra-017142	Brassica rapa	62.53	1.00e-163	568.00
IUUC-Cja-018802	Callithrix jacchus	41.71	9.00e-77	280.00
IUUC-Cfa-020535	Canis familiaris	41.47	1.00e-76	280.00
IUUC-Cpo-022216	Cavia porcellus	41.47	4.00e-76	278.00
IUUC-Cre-022883	Chlamydomonas reinhardtii	29.93	4.00e-28	119.00
IUUC-Csa-023095	Chlorocebus sabaeus	41.71	1.00e-76	280.00
IUUC-Cho-024527	Choloepus hoffmanni	27.53	3.00e-26	113.00
IUUC-Cin-025683	Ciona intestinalis	41.09	2.00e-72	265.00
IUUC-Csv-026331	Ciona savignyi	38.36	2.00e-60	226.00
IUUC-Dre-027731	Danio rerio	41.08	3.00e-80	291.00
IUUC-Dno-029192	Dasypus novemcinctus	42.18	4.00e-77	281.00
IUUC-Ete-032932	Echinops telfairi	36.90	1.00e-63	237.00
IUUC-Eca-034100	Equus caballus	41.71	9.00e-77	280.00
IUUC-Fca-036138	Felis catus	41.71	7.00e-77	281.00
IUUC-Fal-037527	Ficedula albicollis	32.73	8.00e-36	144.00
IUUC-Gmo-038895	Gadus morhua	41.49	2.00e-81	295.00
IUUC-Gga-040447	Gallus gallus	41.15	2.00e-71	262.00
IUUC-Gac-041796	Gasterosteus aculeatus	43.07	2.00e-83	301.00
IUUC-Gma-042993	Glycine max	69.44	0.00e+00	657.00
IUUC-Ggo-045613	Gorilla gorilla	41.71	9.00e-77	280.00
IUUC-Hsa-046377	Homo sapiens	41.71	5.00e-77	281.00
IUUC-Hvu-047075	Hordeum vulgare	58.47	4.00e-141	494.00
IUUC-Itr-048849	Ictidomys tridecemlineatus	40.53	2.00e-73	269.00
IUUC-Lch-050050	Latimeria chalumnae	31.83	4.00e-47	182.00
IUUC-Lpe-051327	Leersia perrieri	56.33	6.00e-148	516.00
IUUC-Laf-053407	Loxodonta africana	41.47	2.00e-76	280.00
IUUC-Mcc-055604	Macaca mulatta	41.71	7.00e-77	281.00
IUUC-Meu-056043	Macropus eugenii	40.52	3.00e-70	258.00
IUUC-Mtr-058683	Medicago truncatula	70.28	8.00e-179	619.00
IUUC-Mga-059697	Meleagris gallopavo	41.74	1.00e-36	146.00
IUUC-Mmr-061338	Microcebus murinus	41.71	7.00e-77	281.00
IUUC-Mdo-062689	Monodelphis domestica	41.47	9.00e-69	253.00
IUUC-Mmu-063993	Mus musculus	41.47	2.00e-76	280.00
IUUC-Mac-065466	Musa acuminata	60.76	6.00e-170	590.00
IUUC-Mpu-066622	Mustela putorius furo	41.23	4.00e-76	278.00
IUUC-Mlu-067235	Myotis lucifugus	42.33	1.00e-76	280.00
IUUC-Nle-069048	Nomascus leucogenys	42.33	1.00e-76	280.00
IUUC-Ont-072060	Oreochromis niloticus	42.11	1.00e-82	300.00
IUUC-Ocu-074684	Oryctolagus cuniculus	41.47	2.00e-76	279.00
IUUC-Oba-075028	Oryza barthii	58.84	5.00e-150	523.00
IUUC-Obr-076114	Oryza brachyantha	59.45	4.00e-151	527.00
IUUC-Ogl-077918	Oryza glaberrima	58.84	6.00e-150	523.00
IUUC-Ogu-078824	Oryza glumaepatula	58.84	1.00e-149	522.00
IUUC-Oin-080061	Oryza indica	59.06	1.00e-150	525.00
IUUC-Olo-081064	Oryza longistaminata	60.10	2.00e-147	515.00
IUUC-Ome-081405	Oryza meridionalis	59.06	9.00e-151	526.00
IUUC-Oni-082481	Oryza nivara	57.52	2.00e-147	515.00
IUUC-Opu-083681	Oryza punctata	60.14	4.00e-151	527.00
IUUC-Oru-084398	Oryza rufipogon	58.84	5.00e-150	523.00
IUUC-Osa-086227	Oryza sativa	58.84	1.00e-149	522.00
IUUC-Ola-086755	Oryzias latipes	33.57	2.00e-36	147.00
IUUC-Olu-087847	Ostreococcus lucimarinus	30.48	1.00e-38	153.00
IUUC-Oga-088849	Otolemur garnettii	41.71	8.00e-77	280.00
IUUC-Oar-089474	Ovis aries	39.34	4.00e-66	244.00
IUUC-Ptr-091235	Pan troglodytes	41.71	8.00e-77	280.00
IUUC-Pan-092895	Papio anubis	41.71	1.00e-76	280.00
IUUC-Psi-093973	Pelodiscus sinensis	41.39	5.00e-76	278.00
IUUC-Ppa-095529	Physcomitrella patens	50.73	9.00e-115	406.00
IUUC-Pfo-097275	Poecilia formosa	42.82	2.00e-82	299.00
IUUC-Pab-098299	Pongo abelii	41.71	8.00e-77	281.00
IUUC-Pca-100729	Procavia capensis	38.10	1.00e-66	247.00
IUUC-Ppe-101712	Prunus persica	70.92	0.00e+00	715.00
IUUC-Pva-103030	Pteropus vampyrus	41.71	8.00e-77	280.00
IUUC-Rno-105416	Rattus norvegicus	41.71	1.00e-76	280.00
IUUC-Sha-106545	Sarcophilus harrisii	42.08	9.00e-69	254.00
IUUC-Sja-107779	Schizosaccharomyces japonicus	29.89	1.00e-28	121.00
IUUC-Smo-109128	Selaginella moellendorffii	51.11	2.00e-115	408.00
IUUC-Sit-110744	Setaria italica	58.70	2.00e-146	511.00
IUUC-Sly-111727	Solanum lycopersicum	65.47	1.00e-174	605.00
IUUC-Stu-112421	Solanum tuberosum	66.14	3.00e-177	613.00
IUUC-Sbi-114821	Sorghum bicolor	55.82	9.00e-147	513.00
IUUC-Ssc-115612	Sus scrofa	41.71	1.00e-76	280.00
IUUC-Tgu-116760	Taeniopygia guttata	33.20	2.00e-35	143.00
IUUC-Tru-117708	Takifugu rubripes	42.82	3.00e-81	295.00
IUUC-Tsy-119579	Tarsius syrichta	37.29	7.00e-63	234.00
IUUC-Tni-120739	Tetraodon nigroviridis	42.08	6.00e-79	287.00
IUUC-Tca-121555	Theobroma cacao	72.81	0.00e+00	633.00
IUUC-Tae-124421	Triticum aestivum	57.58	1.00e-145	508.00
IUUC-Tur-126617	Triticum urartu	58.26	7.00e-144	503.00
IUUC-Tbe-128115	Tupaia belangeri	39.85	2.00e-64	239.00
IUUC-Ttr-128231	Tursiops truncatus	42.48	3.00e-44	172.00
IUUC-Vpa-130145	Vicugna pacos	33.60	3.00e-35	143.00
IUUC-Vvi-131540	Vitis vinifera	67.15	0.00e+00	660.00
IUUC-Xtr-131860	Xenopus tropicalis	37.53	2.00e-57	216.00
IUUC-Xma-133371	Xiphophorus maculatus	42.82	4.00e-82	298.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence