iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114689

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G085200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g006950	Sb05g006950.1	Sb05g006950.1

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/SCF/F-box	42.28	2.00e-53	206.00	IUUC-Ath-007210

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MMRSPRGVGG GCYRGAGGQD QHVDLIPGIP DDVAVDCLAR VPHASHRAMR GVCRGWRSAA 60
STPAFASARA QADANEDLVY LMQFGNPSAA ADDAEPKGDD GPANTPAYGV AVYNVTTGEW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCCATTCC CCTCTTCTCA TCCCATTCCC ATATCCCATA GAGAGAAAAG CAGAGCAAGC 60
TGAGCTCACA CGCAAGCCGA AAGATGATGC GGAGCCCAAG GGGCGTCGGC GGCGGCTGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001810--F-box_dom
IPR015915--Kelch-typ_b-propeller
IPR006652--Kelch_1

Pfam

PF00646--F-box
PF01344--Kelch_1

SMART

SM00612--Kelch

KEGG

sbi:SORBI_05g006950

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006346	Arabidopsis lyrata	35.79	2.00e-63	235.00
IUUC-Ath-007210	Arabidopsis thaliana	42.28	5.00e-58	217.00
IUUC-Bdi-014291	Brachypodium distachyon	81.54	1.00e-135	475.00
IUUC-Bol-015268	Brassica oleracea	37.03	4.00e-47	181.00
IUUC-Bra-017941	Brassica rapa	41.07	3.00e-55	208.00
IUUC-Ggr-040041	Gaeumannomyces graminis	33.58	2.00e-03	35.80
IUUC-Hvu-047595	Hordeum vulgare	83.28	4.00e-130	456.00
IUUC-Mac-064513	Musa acuminata	41.58	5.00e-42	164.00
IUUC-Oba-075542	Oryza barthii	64.86	6.00e-75	273.00
IUUC-Ogl-077394	Oryza glaberrima	85.25	3.00e-162	563.00
IUUC-Ogu-078293	Oryza glumaepatula	82.60	3.00e-163	566.00
IUUC-Oin-079587	Oryza indica	85.25	3.00e-162	563.00
IUUC-Ome-081207	Oryza meridionalis	82.29	3.00e-163	566.00
IUUC-Oni-082785	Oryza nivara	84.97	3.00e-162	563.00
IUUC-Opu-083469	Oryza punctata	81.98	8.00e-167	578.00
IUUC-Oru-084871	Oryza rufipogon	85.25	9.00e-163	565.00
IUUC-Osa-085305	Oryza sativa	85.25	9.00e-163	565.00
IUUC-Pop-099744	Populus trichocarpa	39.10	2.00e-53	202.00
IUUC-Sit-109955	Setaria italica	88.98	1.00e-167	581.00
IUUC-Tae-125085	Triticum aestivum	83.47	5.00e-152	529.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence