iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114036

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000765

Gene Name

SORBI_006G092200

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb06g017730	Sb06g017730.1	Sb06g017730.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.00e-08	33.7	125	167

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+Cl ++ dg   ++lp C+H fha+C+  w       +++ +CPlCr
   Q: 125  CAVCLAELTDGeaARFLPrCQHGFHAECIDLW------LRGHSTCPLCR 167
           ********66656677777*************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSALPENIVA GGSGPAPVPW WSASSPVGGD VVLSGVVLLF AALAFAFVLY HYFTVTVVSR 60
RGGSGTRERE RDGAAVGPPS SAAQQRGTLL GGRDGHGLDP SSVLRALPLT VYKAKGRAAG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCAGCGT TGCCGGAGAA CATCGTCGCA GGCGGCAGTG GCCCGGCGCC GGTCCCGTGG 60
TGGAGCGCTT CCTCGCCGGT GGGCGGCGAC GTCGTCCTCT CCGGCGTAGT CCTCCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_06g017730

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014815	Brachypodium distachyon	51.16	7.00e-31	126.00
IUUC-Hvu-047333	Hordeum vulgare	49.04	2.00e-44	171.00
IUUC-Obr-076471	Oryza brachyantha	49.44	3.00e-29	120.00
IUUC-Oin-079371	Oryza indica	44.79	5.00e-23	100.00
IUUC-Ome-081664	Oryza meridionalis	44.44	4.00e-28	117.00
IUUC-Oni-082658	Oryza nivara	45.31	2.00e-28	118.00
IUUC-Opu-083253	Oryza punctata	45.18	8.00e-23	99.80
IUUC-Oar-089735	Ovis aries	47.69	4.00e-12	62.40
IUUC-Sit-109688	Setaria italica	54.46	7.00e-38	150.00
IUUC-Tae-123453	Triticum aestivum	53.92	2.00e-46	178.00
IUUC-Tur-126264	Triticum urartu	53.30	5.00e-42	163.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence