iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017171

Ensembl Protein ID

Bra033886.1-P

UniProt Accession

M4EYJ4; M4EYJ4_BRARP

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra033886	Bra033886.1	Bra033886.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	3.90e-16	60.0	125	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 3    rvkvsykgeirsfaldlekpgkfedLlkavrt.lt.......................elknsevalkYeDedGDlvtlksDedldkavsllaskk 74
            vkvs++g+++++++dl+ + +++dL +a+++ +                         l+ se+ + YeD+dGD++ l++D++++++v+      
   Q: 125  LVKVSMDGAPYLRKVDLKMYKSYKDLSDALAKmFSsftmgnygaqgmidfmnesklmdLLNSSEYVPSYEDKDGDWM-LVGDVPWEMFVD------ 213
           69******************************62256699*****************88888***************.************...... PP
   S: 75   sllrlliqk 83
           s++rl+i+k
   Q: 214  SCKRLRIMK 222
           ********8 PP

Organism

Brassica rapa

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MIGQLIILKA TELCLGLPGD AEANENLAKP AVGNKRGFSE TVDLMLNLQS NKEGAVDLNN 60
VASASKDKTL LKDPAKPPAK AQVVGWPPVR NYRKNIITQQ KTSGKEEASS EKAGNSGGGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCGGAC AGCTTATTAT TCTCAAGGCT ACGGAGCTCT GTCTCGGCCT CCCCGGCGAC 60
GCTGAGGCCA ACGAGAATCT GGCAAAACCG GCGGTGGGAA ACAAGAGAGG CTTCTCAGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005642	Arabidopsis lyrata	89.21	5.00e-112	396.00
IUUC-Oba-075945	Oryza barthii	72.38	2.00e-63	235.00
IUUC-Ogu-078911	Oryza glumaepatula	55.04	3.00e-67	248.00
IUUC-Oin-079136	Oryza indica	72.38	2.00e-63	235.00
IUUC-Ome-081785	Oryza meridionalis	59.64	2.00e-45	175.00
IUUC-Oni-082674	Oryza nivara	72.38	1.00e-63	235.00
IUUC-Osa-086164	Oryza sativa	72.38	2.00e-63	235.00
IUUC-Pop-099950	Populus trichocarpa	72.43	5.00e-94	336.00
IUUC-Ppe-101719	Prunus persica	71.73	2.00e-86	311.00
IUUC-Tca-121826	Theobroma cacao	74.69	6.00e-96	343.00
IUUC-Tre-122196	Trichoderma reesei	38.00	1.50e-01	31.20

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence