iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076103

Ensembl Protein ID

OB12G17220.1

UniProt Accession

J3NCL4; J3NCL4_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G17220	OB12G17220.1	OB12G17220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.10e-25	88.3	21	97

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggk.....tcPvtrqplteedlvPnltlrrliqawceens 73
           ++e flCp+s+++MrdPv+++sG+t++r++I k+++++g+      cP+t+++l++++l P+++lr++i++w+++n+
   Q: 21   IYESFLCPLSKQVMRDPVTIESGVTFEREAILKYFKECGSgarrlVCPITSKELSSTELNPSIALRNTIDEWMHRNE 97
           799********************************99999999*******************************997 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAEVQDGYFD SSTDSLRVEP IYESFLCPLS KQVMRDPVTI ESGVTFEREA ILKYFKECGS 60
GARRLVCPIT SKELSSTELN PSIALRNTID EWMHRNEAAK LDVARKSLTS ECSHSDTLQA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTATTGTTTC CCATCGTGGT GTTCTGGTCA ACCTGCCAAA CATATTCTTC CAACATAAGA 60
TACAACCCTG AGCCTTTTGT AGTGACCCGC TAAAGTGATG GCAGAAGTTC AGGATGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

obr:102716272

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000143	Aegilops tauschii	88.46	0.00e+00	1417.00
IUUC-Atr-002916	Amborella trichopoda	60.93	0.00e+00	936.00
IUUC-Aly-005480	Arabidopsis lyrata	58.24	0.00e+00	811.00
IUUC-Ath-007569	Arabidopsis thaliana	58.74	0.00e+00	816.00
IUUC-Bdi-014487	Brachypodium distachyon	87.33	0.00e+00	1400.00
IUUC-Bol-015955	Brassica oleracea	58.38	0.00e+00	798.00
IUUC-Bra-017058	Brassica rapa	58.05	0.00e+00	803.00
IUUC-Gma-043617	Glycine max	67.68	0.00e+00	1052.00
IUUC-Hvu-047783	Hordeum vulgare	88.71	0.00e+00	1424.00
IUUC-Lpe-050971	Leersia perrieri	95.53	0.00e+00	1476.00
IUUC-Mtr-058511	Medicago truncatula	66.17	0.00e+00	1037.00
IUUC-Mac-064911	Musa acuminata	64.85	0.00e+00	984.00
IUUC-Oba-075225	Oryza barthii	95.79	0.00e+00	1531.00
IUUC-Ogl-077529	Oryza glaberrima	95.91	0.00e+00	1535.00
IUUC-Ogu-078735	Oryza glumaepatula	95.54	0.00e+00	1526.00
IUUC-Oin-079422	Oryza indica	95.42	0.00e+00	1502.00
IUUC-Olo-080644	Oryza longistaminata	87.86	0.00e+00	1375.00
IUUC-Ome-081455	Oryza meridionalis	95.29	0.00e+00	1523.00
IUUC-Oni-082690	Oryza nivara	95.29	0.00e+00	1500.00
IUUC-Opu-083157	Oryza punctata	95.66	0.00e+00	1524.00
IUUC-Oru-085058	Oryza rufipogon	95.42	0.00e+00	1502.00
IUUC-Osa-086000	Oryza sativa	95.42	0.00e+00	1502.00
IUUC-Ppa-096021	Physcomitrella patens	48.86	0.00e+00	710.00
IUUC-Pop-099966	Populus trichocarpa	65.68	0.00e+00	1028.00
IUUC-Ppe-101973	Prunus persica	64.45	0.00e+00	1013.00
IUUC-Smo-109219	Selaginella moellendorffii	47.01	0.00e+00	662.00
IUUC-Sit-110490	Setaria italica	87.64	0.00e+00	1380.00
IUUC-Sly-111702	Solanum lycopersicum	65.41	0.00e+00	953.00
IUUC-Stu-111962	Solanum tuberosum	64.33	0.00e+00	1005.00
IUUC-Tca-121113	Theobroma cacao	66.54	0.00e+00	1051.00
IUUC-Tur-126573	Triticum urartu	88.09	0.00e+00	1415.00
IUUC-Vvi-131623	Vitis vinifera	66.17	0.00e+00	1071.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence