iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112636

Ensembl Protein ID

PGSC0003DMT400049677

UniProt Accession

M1BP59; M1BP59_SOLTU

Protein Name

Auxin-responsive protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400019302	PGSC0003DMT400049677	PGSC0003DMT400049677

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UFD/PB1	9.20e-20	71.9	88	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UFD/PB1

   S: 2    vrvkvsykgeirsfaldlekpgkfedLlkavrt.lt..........elknsevalkYeDedGDlvtlksDedldkavsllaskksllrl 79
           + +kvs++g+++++++dl+++ ++++Llka++  ++          ++++s++a++YeD+dGD++ l++D+++++++s      s++rl
   Q: 88   MYLKVSMDGAPYLRKIDLKVYKSYQELLKALQNmFKctigvysereGYNGSDYAPTYEDKDGDWM-LVGDVPWEMFIS------SCKRL 169
           569******************************7336799999999*******************.************......***** PP
   S: 80   liqk 83
           +i k
   Q: 170  RIIK 173
           *997 PP

Organism

Solanum tuberosum

Functional Description
(View)

Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.

Protein Sequence
(Fasta)

MGIYEKDLND LEATELRLGL PGIIDESSTS TSTAKNSKKR PSSSVNENEQ QDSPPPPKAQ 60
VVGWPPVRSY RKNHVSKLSE SDNNSSGMYL KVSMDGAPYL RKIDLKVYKS YQELLKALQN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGATTTTCTG GAGCAGGGCA TTGAATACTA GCGTGTGGAG TGTCCCTCTT ATGTTCCCTC 60
ATTGCCGGTC ATGTGAGGGA CACCATTCCC TGTTGCATCA AAATTGTGTT CCTAAACTAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0927--Auxin signaling pathway
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation

Interpro

IPR033389--AUX/IAA_dom
IPR003311--AUX_IAA
IPR000270--PB1_dom

PROSITE

PS51745--PB1

Pfam

PF02309--AUX_IAA

Gene Ontology

GO:0005634--C:nucleus
GO:0009734--P:auxin-activated signaling pathway
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated

KEGG

sot:102578779

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002618	Amborella trichopoda	59.69	1.00e-57	214.00
IUUC-Aor-010084	Aspergillus oryzae	26.98	5.20e+00	24.30
IUUC-Bdi-014020	Brachypodium distachyon	48.72	3.00e-41	159.00
IUUC-Gma-042959	Glycine max	63.50	4.00e-69	252.00
IUUC-Nfi-068542	Neosartorya fischeri	29.51	1.20e+00	26.20
IUUC-Oba-075141	Oryza barthii	51.04	6.00e-49	185.00
IUUC-Ogu-078093	Oryza glumaepatula	50.78	2.00e-48	183.00
IUUC-Oin-079780	Oryza indica	50.78	2.00e-47	181.00
IUUC-Oni-083078	Oryza nivara	50.78	2.00e-47	181.00
IUUC-Oru-084991	Oryza rufipogon	50.78	2.00e-47	181.00
IUUC-Osa-085321	Oryza sativa	50.78	2.00e-47	181.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence