iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076509

Ensembl Protein ID

OB12G25710.1

UniProt Accession

J3NF13; J3NF13_ORYBR

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB12G25710	OB12G25710.1	OB12G25710.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-06	29.5	65	101

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtcla.f......sd..tllvsGsdDgtikvWD 29
           H+ +v ++  f      s+  +l++s+s Dg i++WD
   Q: 65   HSTRVKGIVvFddkndgSEvcNLIASASSDGIIRIWD 101
           66666675436777666445589************** PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MAAEEKVTVH DSEDARIIHE IDCGKRVLAF ASAKKGVLYT GGEERGIAAW DLSSGKVTSR 60
IEGAHSTRVK GIVVFDDKND GSEVCNLIAS ASSDGIIRIW DARMMANQKP TPLAEANTKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGATTCGT GATGGCCGCC GAGGAGAAGG TGACCGTGCA CGACTCTGAG GACGCTAGGA 60
TCATCCATGA GATTGATTGC GGCAAAAGGG TGCTCGCCTT CGCGTCCGCT AAGGTATTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000839	Aegilops tauschii	81.20	1.00e-56	210.00
IUUC-Atr-003018	Amborella trichopoda	49.24	2.00e-32	132.00
IUUC-Aly-006245	Arabidopsis lyrata	54.81	4.00e-34	137.00
IUUC-Ath-007309	Arabidopsis thaliana	54.81	1.00e-34	139.00
IUUC-Bdi-014505	Brachypodium distachyon	81.68	3.00e-62	230.00
IUUC-Bol-015458	Brassica oleracea	52.59	4.00e-35	141.00
IUUC-Bra-017790	Brassica rapa	54.07	2.00e-35	142.00
IUUC-Cho-025088	Choloepus hoffmanni	33.33	8.00e-11	60.10
IUUC-Gma-044006	Glycine max	57.78	4.00e-39	154.00
IUUC-Ggo-045365	Gorilla gorilla	31.71	1.00e-09	57.00
IUUC-Hvu-047592	Hordeum vulgare	82.44	9.00e-56	207.00
IUUC-Lpe-051569	Leersia perrieri	87.79	7.00e-66	243.00
IUUC-Mtr-057886	Medicago truncatula	59.57	6.00e-43	166.00
IUUC-Mac-064987	Musa acuminata	63.91	6.00e-46	177.00
IUUC-Ogl-076960	Oryza glaberrima	92.31	8.00e-68	249.00
IUUC-Ogu-078660	Oryza glumaepatula	86.92	2.00e-60	224.00
IUUC-Oin-079790	Oryza indica	90.44	5.00e-69	253.00
IUUC-Ome-081631	Oryza meridionalis	92.63	6.00e-46	176.00
IUUC-Oni-083082	Oryza nivara	89.71	1.00e-68	251.00
IUUC-Opu-083394	Oryza punctata	88.72	1.00e-66	245.00
IUUC-Oru-084461	Oryza rufipogon	91.73	8.00e-68	249.00
IUUC-Osa-085655	Oryza sativa	93.08	1.00e-67	248.00
IUUC-Olu-087657	Ostreococcus lucimarinus	30.53	3.00e-10	58.90
IUUC-Ppa-095939	Physcomitrella patens	41.41	2.00e-24	104.00
IUUC-Pop-099969	Populus trichocarpa	56.20	7.00e-41	160.00
IUUC-Ppe-101839	Prunus persica	60.90	4.00e-41	160.00
IUUC-Smo-108738	Selaginella moellendorffii	39.85	1.00e-23	102.00
IUUC-Sit-110114	Setaria italica	82.44	9.00e-62	229.00
IUUC-Sly-111581	Solanum lycopersicum	57.14	4.00e-40	157.00
IUUC-Stu-112770	Solanum tuberosum	57.89	5.00e-41	160.00
IUUC-Sbi-114797	Sorghum bicolor	79.39	1.00e-59	222.00
IUUC-Tsy-119593	Tarsius syrichta	30.83	5.00e-09	54.70
IUUC-Tca-121500	Theobroma cacao	61.07	3.00e-41	160.00
IUUC-Tae-122830	Triticum aestivum	82.44	1.00e-56	212.00
IUUC-Tur-126015	Triticum urartu	80.15	4.00e-55	205.00
IUUC-Vvi-131065	Vitis vinifera	58.65	6.00e-40	156.00
IUUC-Xtr-132601	Xenopus tropicalis	32.00	2.00e-10	58.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence