iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080479

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539412.1_FG002	KN539412.1_FGT002	KN539412.1_FGP002

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-07	30.6	311	343

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH d  ++ a+ +d + l++G+ D t++vWD+r
   Q: 311  GHLDYSFSSAWhPDgRVLATGNQDRTCRVWDVR 343
           89999*******99999**************97 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAHDLHDDLE FVSGGGDDDD YYLEFDHDSG HGFHISAGAA ASQRNKQMDD TSALDYKEGK 60
DMQGIPWERL NYSRNQYREM RLRQYKNYEN LTMPRDGLEK ECKQAEREDT FYDFHLNTRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCCACG ACTTGCACGA CGACCTGGAG TTCGTCTCCG GCGGCGGCGA CGACGACGAC 60
TACTACTTGG AGTTCGATCA CGATTCCGGC CATGGCTTCC ACATCTCCGC CGGCGCTGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000486	Aegilops tauschii	62.10	8.00e-143	499.00
IUUC-Bdi-015063	Brachypodium distachyon	76.10	5.00e-122	429.00
IUUC-Hvu-047809	Hordeum vulgare	70.45	3.00e-166	577.00
IUUC-Lpe-051582	Leersia perrieri	82.84	0.00e+00	663.00
IUUC-Mac-065012	Musa acuminata	64.23	2.00e-136	479.00
IUUC-Obr-076093	Oryza brachyantha	79.05	0.00e+00	630.00
IUUC-Ogu-078133	Oryza glumaepatula	90.40	0.00e+00	712.00
IUUC-Oin-079185	Oryza indica	87.71	0.00e+00	717.00
IUUC-Oni-082850	Oryza nivara	89.90	0.00e+00	717.00
IUUC-Sit-110668	Setaria italica	67.46	2.00e-137	480.00
IUUC-Sbi-114172	Sorghum bicolor	68.38	1.00e-152	531.00
IUUC-Tca-121603	Theobroma cacao	54.10	1.00e-126	445.00
IUUC-Tae-123203	Triticum aestivum	71.97	2.00e-169	587.00
IUUC-Tur-126710	Triticum urartu	56.46	2.00e-131	461.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence