iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-015052

UUCD1 version

UUC-BrD-01247

Ensembl Protein ID

BRADI1G00210.1

UniProt Accession

I1GKD7; I1GKD7_BRADI

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G00210	BRADI1G00210.1	BRADI1G00210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-34	116.0	350	384
UBD/Beta-Prp	1.70e-61	208.5	57	287

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           H d+vtcla+  s+++++sG+ Dgt+++WD  +g 
   Q: 350  HDDGVTCLAWigSSRYVASGCIDGTVHIWDSLSGE 384
           99*********866****************76665 PP

UBD/Beta-Prp

   S: 7    ghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlsls 101
           + +++v  + +   d sl+++g++d++  +w++ +   +++l gh+++v++v fs+dgk+ + gs D+ i+vw+ st++   tl+g e+    l+
   Q: 57   DMMDEVFAAACSPVDASLVVSGGKDDRGFLWRIGSAEDVQELPGHKDTVSTVAFSSDGKLVACGSMDGRINVWNTSTRTLQGTLEGSESGFEWLK 151
           5566777767777799******************************************************************************* PP
   S: 102  fspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsngke 194
           ++   + +++Gs+d  i +w+ + +  ++ t+sgh+ +v+c  + pdg+l+ +Gs+D t+r+Wd +++ + +     g+ht+  ++l+++ ++++
   Q: 152  WHLRHNLIIAGSEDFNIWMWNADLNAFVN-TFSGHSNTVTCGDFTPDGKLICTGSDDATLRIWDFNSAHCRHVVrdHGYHTQGLTCLAITWDSQS 245
           *****************************.********************************************99999**************** PP
   S: 195  lvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnder 236
           +vsgs+d++v ++++ +g++v +l ght+ v ++  sp+  +
   Q: 246  IVSGSQDSSVHIVSINSGKVVGSLVGHTNSVECIGISPRYFF 287
           **********************************99876655 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MIRAAPAAAV MSIAGDVPRE GSEGEEVFID DDDIINEIPL DEEDLPDQDD DDEQDQDMMD 60
EVFAAACSPV DASLVVSGGK DDRGFLWRIG SAEDVQELPG HKDTVSTVAF SSDGKLVACG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGATCCGTG CGGCACCAGC GGCGGCGGTC ATGAGTATTG CAGGCGATGT CCCCAGAGAA 60
GGCTCCGAAG GGGAGGAGGT CTTCATCGAC GACGATGACA TCATCAATGA GATACCCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0030687--C:preribosome, large subunit precursor
GO:0051082--F:unfolded protein binding
GO:0042273--P:ribosomal large subunit biogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ete-033100	Echinops telfairi	39.32	4.00e-39	154.00
IUUC-Hvu-047247	Hordeum vulgare	82.47	5.00e-164	569.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence