iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bdi-014318

Ensembl Protein ID

BRADI1G08050.1

UniProt Accession

I1GN38; I1GN38_BRADI

Genbank Protein ID

KQK13099.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000880

Gene Name

BRADI_1g08050

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI1G08050	BRADI1G08050.1	BRADI1G08050.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-11	43.2	132	168

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH d+   laf ++ ++l ++s D+t ++WD++tg+ 
   Q: 132  GHLDRLARLAFhPSgKYLGTASFDKTWRLWDVHTGKE 168
           79999999****666*******************986 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MDRRDRLHAQ EDEQGAAEEE AEQIQYPFFT EGTKEFLQAR VDIAMHSLPL AKARVERAKR 60
RLRDPDEDPE AEAAGLAVKQ AGEFALERSV VGDDRPLTGC SFSRDASMLA TSSWSGIIKR 120

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Nucleotide Sequence
(Fasta)

ATGGATCGCC GCGACCGCCT CCACGCGCAG GAGGACGAGC AGGGAGCCGC CGAGGAGGAG 60
GCGGAGCAGA TCCAGTACCC GTTCTTCACC GAGGGCACCA AGGAATTTCT CCAGGCGCGC 120

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Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0046540--C:U4/U6 x U5 tri-snRNP complex
GO:0030621--F:U4 snRNA binding
GO:0017070--F:U6 snRNA binding
GO:0000398--P:mRNA splicing, via spliceosome

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence