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Tag Content
UUCD2 ID IUUC-Pop-099113
UUCD1 version UUC-PoT-00724
Ensembl Protein ID POPTR_0014s03790.1
UniProt Accession U5FS75; U5FS75_POPTR
Genbank Protein ID ERP52831.1
Protein Name Uncharacterized protein
Genbank Nucleotide ID CM000350
Gene Name POPTRDRAFT_286743; POPTR_0014s03790g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0014s03790 POPTR_0014s03790.1 POPTR_0014s03790.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.00e-31 106.5 199 236
UBD/Beta-Prp 4.70e-43 148.6 198 443
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
    H+d ++cl + d tll s+s+D t kvW++++ ++l
   Q: 199 HSDAISCLTLnEDrTLLYSASWDRTFKVWRISDSKCLE 236
    **********8668*****************9999986 PP
   


   UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls......tgkcvhtlkg 92
    +h++ i+c++ +d++ll ++s+d+t kvw++++ k+l+s+ h+++v++v s dg + tgs D+t+kvw + + ++v+tl +
   Q: 198 KHSDAISCLTLNEDRTLLYSASWDRTFKVWRISDSKCLESINAHDDAVNSVVASLDG-LVFTGSADGTVKVWKREqqgkrtKHSPVQTLLK 287
    68999***************************************************9.**************666667777999******* PP
   S: 93 hedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..ktgkllrtltgghtd 181
    +e+ v++l+++ sg+++ Gs+d +++ w+ e++ +l+gh+ +v c+++ + nl++sGs+D+t+ +W+ k ++ ltg h++
   Q: 288 QESAVTALAVNTSGSVVYCGSSDGMVNYWECEKQLTHGGVLKGHKLAVLCLASAG--NLVFSGSADKTICVWRRddKIHACMSVLTG-HNG 375
    *****************************9999888888************9999..***************9999999*******9.*** PP
   S: 182 svyslsfdsng.........kelvsgsldgtvklwdlq.....tgecvrtlnghtdnvksvrfspnde 235
    +v++l+++++ + sgsld++vk+w++ ++ + ++ ++ + +v+++ d
   Q: 376 PVKCLAVEEDHekskdgdqrWVVYSGSLDKSVKVWSVAemapdMYQMAMMQQQQQYQRHMVEVWAGDS 443
    ******6666666666676667789************9776664444666666677777777774444 PP
   

Organism Populus trichocarpa
Protein Sequence
(Fasta)
IPRSKFGNSV HSDPNLSATV AAIPRDEVFA YRNSSASFTS PASYDPNRMS CEGSPMTMSP 60
WNQTGAGSNF PWSIEENLPQ NGLIGSLVRE EGHIYSLAAT KDLLYTGSDS KNIRVWKNLK 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Pop-099113|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATACCGAGAT CGAAATTCGG CAACAGTGTG CATTCTGATC CAAATCTTTC AGCAACAGTT 60
GCGGCAATAC CCCGTGATGA GGTTTTTGCC TATCGAAATA GCAGTGCTTC CTTTACAAGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Pop-099113|E3,WD_repeat;UBD,Beta-Prp|Populus trichocarpa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG pop:POPTR_0014s03790g
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Bdi-014024 Brachypodium distachyon 61.33 7.00e-136 476.00
IUUC-Gma-043481 Glycine max 68.63 4.00e-169 587.00
IUUC-Hvu-047445 Hordeum vulgare 60.63 6.00e-134 470.00
IUUC-Lpe-051623 Leersia perrieri 58.99 6.00e-129 453.00
IUUC-Mtr-057641 Medicago truncatula 71.26 3.00e-170 590.00
IUUC-Oba-075783 Oryza barthii 59.91 3.00e-136 477.00
IUUC-Obr-076198 Oryza brachyantha 59.47 6.00e-133 466.00
IUUC-Ogl-077280 Oryza glaberrima 59.91 3.00e-136 477.00
IUUC-Ogu-078924 Oryza glumaepatula 60.13 3.00e-137 481.00
IUUC-Olo-080744 Oryza longistaminata 61.80 5.00e-113 400.00
IUUC-Ome-081447 Oryza meridionalis 54.00 1.00e-101 363.00
IUUC-Sit-109859 Setaria italica 59.68 1.00e-125 442.00
IUUC-Stu-112301 Solanum tuberosum 70.17 2.00e-163 568.00
IUUC-Sbi-114260 Sorghum bicolor 63.48 2.00e-134 472.00
IUUC-Tae-123171 Triticum aestivum 56.38 1.00e-131 462.00
IUUC-Tur-126539 Triticum urartu 58.28 6.00e-88 316.00
IUUC-Vvi-131140 Vitis vinifera 77.62 0.00e+00 628.00
Created Date 25-Jun-2017

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