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Tag Content
iUUCD ID IUUC-Sly-111340
Ensembl Protein ID Solyc07g025140.2.1
UniProt Accession K4CD65; K4CD65_SOLLC
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc07g025140.2 Solyc07g025140.2.1 Solyc07g025140.2.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 3.50e-32 109.8 205 241
UBD/Beta-Prp 1.80e-54 185.7 205 434
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
    H d ++cl+ ++ +ll s+s+D t kvW+++ +++
   Q: 205 HVDAISCLSMdQTrGLLYSASWDRTFKVWNVDNSKCI 241
    99********97779****************998886 PP
   


   UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls......tgkcvhtlkgh 93
    h + i+c+ + + + ll ++s+d+t kvw+v++ k+++s++ h+++v++v s +g i tgs D+t+kvw + + v+tl ++
   Q: 205 HVDAISCLSMDQTRGLLYSASWDRTFKVWNVDNSKCIESVKAHDDAVNSVVTSVEG-IVYTGSADGTVKVWQREntgkhpKHVFVQTLLNQ 294
    6688999************************************************9.**************666655666777888999** PP
   S: 94 edsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl....tgght 180
    e v++l +s+sg+++ Gs+d +++ w+ e++ +l+gh+ ++ c++ + nll sGs+D+t+ +W+ +k ++tl +g h+
   Q: 295 ECAVTALVVSKSGSVVYCGSSDGVVNFWEREKQLSHGGVLKGHKLAILCLAAAG--NLLLSGSADKTICVWRR-DKKSIHTLlsvlSG-HN 381
    ****************************6666555555************9999..***************65.77888888888465.** PP
   S: 181 dsvyslsfdsng........kelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
    ++v++l++++++ + sgsld++vk+w ++ + + t n+ +d +
   Q: 382 GPVKCLAVEEDKestetdqkWVVYSGSLDKSVKVWTVSDKAPIITHNNNSDSF 434
    *******777777788887677889*************998888877766654 PP
   

Organism Solanum lycopersicum
Protein Sequence
(Fasta)
MFVDTSHLPP KLGNTVHSDP NISSSHIDDD NNNFNARHSS FSAYEANRLS GEGSPMMMSP 60
WNQGSPWSKF DEGNNNSQNN NNNNINGLIG SLVREEGHIY SLATKNDLLY TGSDSKNIRV 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Sly-111340|E3,WD_repeat;UBD,Beta-Prp|Solanum lycopersicum
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TGCCTTTTCT TGCCAGCCTA GCTACTAAGA GATTGTTTGT TGTGAGAAGG CCAATTAAGC 60
ACATAATGTT TGTTGATACA AGCCATTTGC CTCCTAAATT AGGAAACACT GTTCACTCGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Sly-111340|E3,WD_repeat;UBD,Beta-Prp|Solanum lycopersicum
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG sly:101260153
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Bdi-014024 Brachypodium distachyon 58.04 8.00e-129 452.00
IUUC-Hvu-047445 Hordeum vulgare 58.69 2.00e-124 438.00
IUUC-Obr-076198 Oryza brachyantha 58.00 9.00e-130 456.00
IUUC-Olo-080744 Oryza longistaminata 61.28 6.00e-111 393.00
IUUC-Sit-109859 Setaria italica 57.08 6.00e-120 423.00
IUUC-Stu-112301 Solanum tuberosum 93.21 0.00e+00 769.00
IUUC-Tae-122837 Triticum aestivum 53.43 2.00e-117 415.00
Created Date 25-Jun-2017

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