iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114876

UUCD1 version

UUC-SoB-00052

Ensembl Protein ID

Sb02g033150.1

UniProt Accession

A0A1B6QE62; A0A1B6QE62_SORBI

Genbank Protein ID

KXG36212.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000761

Gene Name

SORBI_002G301000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb02g033150	Sb02g033150.1	Sb02g033150.1
Sb02g033150	Sb02g033150.2	Sb02g033150.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	3.20e-06	28.4	197	239

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df  +  ++ lp C+H+fh  C+ +w        ++++CPlCr
   Q: 197  CSVCLQDFGAQqfVRALPqCQHIFHVRCIDNW------LLRHASCPLCR 239
           ********44445889999*************......999*******8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDHSVPSPSS SPRTAAAAPG GPCCRFDALR RACARHAAVA ARAAGWTLGA LLTCVFAVVG 60
SLVGIFIGAF MGMSTESGMF RGAGVGAVSG AVFSIEAVES CIEIWRSSHS GKYSILFVLD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCATTAATGG CCGCTCCCTC TCTATCCCCT TCGTCGTCTC GTCTCGTCTC GCGCTAGGAC 60
TCGACTCGCC CCCCGCCTCC CTCCGGCTTA ACCCTCAAGA TTTCTCCCTC CTCCCGCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014157	Brachypodium distachyon	83.13	7.00e-100	355.00
IUUC-Hvu-047717	Hordeum vulgare	85.39	1.00e-79	287.00
IUUC-Lpe-050990	Leersia perrieri	89.22	8.00e-100	355.00
IUUC-Oba-075172	Oryza barthii	89.22	7.00e-98	348.00
IUUC-Obr-076253	Oryza brachyantha	89.53	3.00e-92	330.00
IUUC-Ogl-077372	Oryza glaberrima	89.22	7.00e-98	348.00
IUUC-Ogu-078405	Oryza glumaepatula	89.22	1.00e-97	347.00
IUUC-Oin-079516	Oryza indica	89.22	7.00e-98	348.00
IUUC-Olo-081046	Oryza longistaminata	88.52	3.00e-86	310.00
IUUC-Ome-081409	Oryza meridionalis	87.37	3.00e-92	330.00
IUUC-Oni-082998	Oryza nivara	89.22	7.00e-98	348.00
IUUC-Opu-083188	Oryza punctata	89.71	1.00e-99	354.00
IUUC-Oru-085074	Oryza rufipogon	89.22	7.00e-98	348.00
IUUC-Osa-086207	Oryza sativa	88.73	7.00e-98	348.00
IUUC-Olu-087632	Ostreococcus lucimarinus	36.47	2.00e-11	60.80
IUUC-Sit-110003	Setaria italica	94.41	5.00e-92	328.00
IUUC-Sly-111606	Solanum lycopersicum	39.18	1.00e-29	122.00
IUUC-Tae-124894	Triticum aestivum	88.72	8.00e-92	328.00
IUUC-Tur-126137	Triticum urartu	43.64	2.00e-33	135.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence