iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049526

Ensembl Protein ID

ENSLACP00000003001.1

UniProt Accession

H3A030; H3A030_LATCH

Genbank Protein ID

ENSLACP00000003001

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01163487

Gene Name

TAF5

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000002684.1	ENSLACT00000003027.1	ENSLACP00000003001.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-43	144.9	363	400
UBD/Beta-Prp	2.00e-77	260.6	295	615

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH++ v++++f +d ++l+s+s Dgt+++W+l t+++l
   Q: 363  GHSGAVYGISFgPDrNYLLSSSEDGTVRLWSLQTFTCL 400
           8*********************************9996 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...............................lrslsgheaevtavkfspdgkilvtg 70
           +t+v++++d+s++a g++d+t++vw+vt++kl                               +r l gh+++v+ ++f pd+++l+++
   Q: 295  LTAVDVTDDSSMIAGGFADSTVRVWSVTPKKLrsvktasdlglidkesddvlerimdektaseVRILHGHSGAVYGISFGPDRNYLLSS 383
           799************************************************************************************** PP
   S: 71   seDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDr 159
           seD+t+++w+l+t++c++ +kgh++ v++++fsp+g++++sG+hdr++r+w ++++q l+ +++gh + v+c+++hp++n++++Gs+Dr
   Q: 384  SEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFISGGHDRIARLWATDHYQPLR-IFAGHLADVTCTKFHPNSNYVATGSADR 471
           ************************************************************.**************************** PP
   S: 160  tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiri 248
           t+rlWd+ +   ++ ++    ++++ l f++ngk+l+sg++dg+v lwdl +g  + +l+ghtd+v+ + fs+++e+l+sgs+D+++r+
   Q: 472  TIRLWDILNVVEVHVFQA-LCGPIHALMFSPNGKFLASGATDGRVLLWDLGHGMLIGELKGHTDTVYALCFSRDGEILASGSMDNTVRL 559
           *****************8.********************************************************************** PP
   S: 249  W.......dlrsgdllktlqlhn..............ssvisvavlsfgdnvlvlg 283
           W       dl+++d+++++ + n              +++++v++l+f++++l+l+
   Q: 560  WdavkvfeDLETDDFTTATGHINlidnsqelllgtymTKSTPVTHLHFTRRNLLLA 615
           *************************************************9998775 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

PICFVAAAVS ASNAEDQPDV SAVLSAYNQQ GDPALYEDYY SNLKKFVESV LDCHRAELSQ 60
LFYPLFVHMY LELVYNQHES EAKSFFDRFH GDQECYYHDD LRVLSSLTKK EHMKGNETLL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCCCTAACA ACCACAGTTC TGTTGCCGAG CGAACAGTGT GTGGACGCCC TCCGCTCACC 60
AATCTGTTTT GTTGCCGCAG CTGTTTCGGC CTCGAATGCG GAGGACCAGC CCGACGTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007582--TFIID_NTD2
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04494--TFIID_NTD2
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000851	Aegilops tauschii	48.48	8.00e-61	227.00
IUUC-Aml-001607	Ailuropoda melanoleuca	88.65	0.00e+00	1083.00
IUUC-Atr-003136	Amborella trichopoda	41.69	4.00e-86	312.00
IUUC-Apl-004193	Anas platyrhynchos	86.18	0.00e+00	1043.00
IUUC-Aca-004522	Anolis carolinensis	86.84	0.00e+00	1079.00
IUUC-Aly-006476	Arabidopsis lyrata	35.89	2.00e-102	366.00
IUUC-Ath-006587	Arabidopsis thaliana	44.09	9.00e-78	284.00
IUUC-Ago-007736	Ashbya gossypii	40.66	6.00e-87	315.00
IUUC-Acl-008092	Aspergillus clavatus	30.73	2.00e-83	303.00
IUUC-Afl-008659	Aspergillus flavus	35.90	9.00e-75	274.00
IUUC-Afu-008902	Aspergillus fumigatus	36.34	3.00e-74	273.00
IUUC-Ani-009462	Aspergillus nidulans	31.59	2.00e-78	286.00
IUUC-Aor-010083	Aspergillus oryzae	35.90	7.00e-75	275.00
IUUC-Ate-010271	Aspergillus terreus	36.83	3.00e-75	276.00
IUUC-Ame-010721	Astyanax mexicanus	85.36	0.00e+00	1048.00
IUUC-Bgr-012257	Blumeria graminis	28.08	2.00e-66	247.00
IUUC-Bta-013539	Bos taurus	88.32	0.00e+00	1080.00
IUUC-Bci-013737	Botrytis cinerea	29.13	2.00e-72	266.00
IUUC-Bdi-015041	Brachypodium distachyon	45.32	3.00e-75	276.00
IUUC-Bol-015483	Brassica oleracea	36.04	6.00e-102	364.00
IUUC-Bra-017147	Brassica rapa	35.73	1.00e-101	363.00
IUUC-Cel-018451	Caenorhabditis elegans	31.57	4.00e-79	288.00
IUUC-Cja-018881	Callithrix jacchus	88.65	0.00e+00	1082.00
IUUC-Cfa-020056	Canis familiaris	88.65	0.00e+00	1082.00
IUUC-Cpo-021454	Cavia porcellus	84.40	0.00e+00	1086.00
IUUC-Cre-022736	Chlamydomonas reinhardtii	38.76	2.00e-50	193.00
IUUC-Csa-023045	Chlorocebus sabaeus	88.44	0.00e+00	1038.00
IUUC-Cho-024284	Choloepus hoffmanni	75.75	0.00e+00	828.00
IUUC-Cin-025457	Ciona intestinalis	56.25	5.00e-91	327.00
IUUC-Csv-025882	Ciona savignyi	49.06	7.00e-169	587.00
IUUC-Cgl-026392	Colletotrichum gloeosporioides	28.28	1.00e-69	258.00
IUUC-Cme-027302	Cyanidioschyzon merolae	32.72	1.00e-87	317.00
IUUC-Dre-027980	Danio rerio	84.38	0.00e+00	1030.00
IUUC-Dno-028863	Dasypus novemcinctus	88.82	0.00e+00	1083.00
IUUC-Dor-030561	Dipodomys ordii	88.65	0.00e+00	1080.00
IUUC-Dse-031547	Dothistroma septosporum	29.67	6.00e-74	271.00
IUUC-Dme-031917	Drosophila melanogaster	44.35	4.00e-137	481.00
IUUC-Ete-032319	Echinops telfairi	70.72	0.00e+00	803.00
IUUC-Eca-033927	Equus caballus	88.49	0.00e+00	1095.00
IUUC-Eeu-034449	Erinaceus europaeus	89.07	0.00e+00	869.00
IUUC-Fca-036325	Felis catus	88.65	0.00e+00	1082.00
IUUC-Fal-036604	Ficedula albicollis	88.20	0.00e+00	1076.00
IUUC-Fox-038049	Fusarium oxysporum	33.15	6.00e-45	175.00
IUUC-Fso-038302	Fusarium solani	29.52	1.00e-61	231.00
IUUC-Gmo-038832	Gadus morhua	81.05	0.00e+00	971.00
IUUC-Ggr-039878	Gaeumannomyces graminis	28.96	6.00e-65	242.00
IUUC-Gga-041147	Gallus gallus	87.83	0.00e+00	1094.00
IUUC-Gac-041373	Gasterosteus aculeatus	84.84	0.00e+00	1009.00
IUUC-Gma-043230	Glycine max	36.89	1.00e-110	393.00
IUUC-Ggo-045526	Gorilla gorilla	91.13	0.00e+00	742.00
IUUC-Hsa-045971	Homo sapiens	88.65	0.00e+00	1083.00
IUUC-Hvu-047695	Hordeum vulgare	46.45	5.00e-78	285.00
IUUC-Itr-048400	Ictidomys tridecemlineatus	88.65	0.00e+00	1083.00
IUUC-Kpa-049402	Komagataella pastoris	43.25	7.00e-90	325.00
IUUC-Lpe-050793	Leersia perrieri	34.42	9.00e-79	287.00
IUUC-Loc-052882	Lepisosteus oculatus	86.99	0.00e+00	1060.00
IUUC-Lma-053212	Leptosphaeria maculans	30.68	2.00e-73	270.00
IUUC-Laf-053859	Loxodonta africana	88.65	0.00e+00	1083.00
IUUC-Mcc-054957	Macaca mulatta	88.82	0.00e+00	894.00
IUUC-Meu-056766	Macropus eugenii	90.61	3.00e-179	621.00
IUUC-Mor-057024	Magnaporthe oryzae	28.57	3.00e-58	219.00
IUUC-Mpo-057520	Magnaporthe poae	29.50	9.00e-66	244.00
IUUC-Mtr-058754	Medicago truncatula	37.28	1.00e-112	400.00
IUUC-Mla-058881	Melampsora laricipopulina	37.75	4.00e-75	276.00
IUUC-Mga-059776	Meleagris gallopavo	87.99	0.00e+00	1094.00
IUUC-Mmr-061783	Microcebus murinus	88.82	0.00e+00	894.00
IUUC-Mdo-062856	Monodelphis domestica	88.82	0.00e+00	1083.00
IUUC-Mmu-064218	Mus musculus	88.82	0.00e+00	1084.00
IUUC-Mac-064886	Musa acuminata	49.81	1.00e-63	237.00
IUUC-Mpu-065735	Mustela putorius furo	88.65	0.00e+00	1083.00
IUUC-Mlu-067544	Myotis lucifugus	88.51	0.00e+00	1073.00
IUUC-Nfi-068502	Neosartorya fischeri	36.57	1.00e-75	277.00
IUUC-Ncr-068891	Neurospora crassa	29.20	9.00e-68	251.00
IUUC-Nle-069389	Nomascus leucogenys	88.65	0.00e+00	1083.00
IUUC-Opr-071042	Ochotona princeps	77.75	7.00e-174	603.00
IUUC-Ont-071455	Oreochromis niloticus	85.17	0.00e+00	1016.00
IUUC-Oan-073181	Ornithorhynchus anatinus	87.99	0.00e+00	1073.00
IUUC-Ocu-073758	Oryctolagus cuniculus	87.83	0.00e+00	1085.00
IUUC-Oba-075739	Oryza barthii	42.90	3.00e-71	262.00
IUUC-Obr-076111	Oryza brachyantha	45.40	7.00e-86	311.00
IUUC-Ogl-077914	Oryza glaberrima	34.91	1.00e-90	327.00
IUUC-Ogu-078190	Oryza glumaepatula	34.21	9.00e-82	297.00
IUUC-Oin-079473	Oryza indica	35.43	6.00e-93	334.00
IUUC-Olo-080645	Oryza longistaminata	49.33	5.00e-62	231.00
IUUC-Ome-081831	Oryza meridionalis	40.88	3.00e-62	232.00
IUUC-Oni-082431	Oryza nivara	34.32	7.00e-89	321.00
IUUC-Opu-083325	Oryza punctata	33.72	2.00e-81	296.00
IUUC-Oru-085154	Oryza rufipogon	46.93	5.00e-71	261.00
IUUC-Osa-086189	Oryza sativa	35.59	7.00e-94	337.00
IUUC-Ola-086574	Oryzias latipes	86.94	0.00e+00	1048.00
IUUC-Olu-087616	Ostreococcus lucimarinus	31.32	4.00e-92	332.00
IUUC-Oga-088827	Otolemur garnettii	88.65	0.00e+00	1080.00
IUUC-Oar-089648	Ovis aries	88.32	0.00e+00	1080.00
IUUC-Ptr-091195	Pan troglodytes	88.65	0.00e+00	1083.00
IUUC-Pan-091978	Papio anubis	88.49	0.00e+00	1082.00
IUUC-Psi-093598	Pelodiscus sinensis	88.63	0.00e+00	998.00
IUUC-Pno-094823	Phaeosphaeria nodorum	28.36	2.00e-74	273.00
IUUC-Ppa-095455	Physcomitrella patens	43.11	3.00e-87	316.00
IUUC-Pfo-097120	Poecilia formosa	86.16	0.00e+00	1016.00
IUUC-Pab-098771	Pongo abelii	88.65	0.00e+00	1083.00
IUUC-Pop-099542	Populus trichocarpa	41.21	8.00e-85	308.00
IUUC-Pca-100804	Procavia capensis	78.52	0.00e+00	825.00
IUUC-Ppe-101686	Prunus persica	35.73	1.00e-100	360.00
IUUC-Pva-102414	Pteropus vampyrus	83.39	0.00e+00	988.00
IUUC-Pte-104359	Pyrenophora teres	28.53	1.00e-72	267.00
IUUC-Pyt-104523	Pyrenophora triticirepentis	28.97	2.00e-75	276.00
IUUC-Rno-105064	Rattus norvegicus	88.82	0.00e+00	1086.00
IUUC-Sce-106186	Saccharomyces cerevisiae	39.41	1.00e-83	304.00
IUUC-Sha-106582	Sarcophilus harrisii	88.67	0.00e+00	1076.00
IUUC-Sja-107683	Schizosaccharomyces japonicus	37.96	3.00e-106	379.00
IUUC-Spo-108142	Schizosaccharomyces pombe	35.53	2.00e-103	369.00
IUUC-Ssl-108456	Sclerotinia sclerotiorum	28.23	1.00e-70	261.00
IUUC-Smo-109097	Selaginella moellendorffii	34.49	5.00e-98	351.00
IUUC-Sit-109804	Setaria italica	36.35	3.00e-96	345.00
IUUC-Sly-111693	Solanum lycopersicum	35.52	9.00e-98	351.00
IUUC-Sar-113412	Sorex araneus	89.71	0.00e+00	731.00
IUUC-Sbi-114849	Sorghum bicolor	35.66	3.00e-94	338.00
IUUC-Sre-114945	Sporisorium reilianum	37.35	2.00e-69	258.00
IUUC-Ssc-115582	Sus scrofa	72.49	0.00e+00	864.00
IUUC-Tgu-116899	Taeniopygia guttata	88.15	0.00e+00	1061.00
IUUC-Tru-118011	Takifugu rubripes	85.50	0.00e+00	1022.00
IUUC-Tsy-119262	Tarsius syrichta	66.53	3.00e-92	332.00
IUUC-Tni-120598	Tetraodon nigroviridis	85.88	0.00e+00	1014.00
IUUC-Tca-121247	Theobroma cacao	35.51	2.00e-104	373.00
IUUC-Tre-121949	Trichoderma reesei	34.41	1.00e-57	218.00
IUUC-Tvi-122626	Trichoderma virens	31.57	8.00e-59	221.00
IUUC-Tae-123335	Triticum aestivum	36.42	5.00e-94	338.00
IUUC-Tur-126005	Triticum urartu	44.96	3.00e-74	273.00
IUUC-Tme-126904	Tuber melanosporum	40.48	2.00e-86	313.00
IUUC-Tbe-127254	Tupaia belangeri	83.06	0.00e+00	987.00
IUUC-Ttr-128544	Tursiops truncatus	88.32	0.00e+00	1079.00
IUUC-Uma-129379	Ustilago maydis	36.52	5.00e-71	263.00
IUUC-Vda-129761	Verticillium dahliae	28.50	3.00e-54	206.00
IUUC-Vpa-130485	Vicugna pacos	88.65	0.00e+00	1082.00
IUUC-Vvi-131171	Vitis vinifera	34.80	1.00e-104	374.00
IUUC-Xtr-132762	Xenopus tropicalis	75.90	0.00e+00	899.00
IUUC-Xma-133583	Xiphophorus maculatus	86.16	0.00e+00	1017.00
IUUC-Yli-134446	Yarrowia lipolytica	36.11	1.00e-109	390.00
IUUC-Zma-135722	Zea mays	35.20	4.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence