iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043145

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000842

Gene Name

LOC100778070; GLYMA_09G016800

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA09G01960	GLYMA09G01960.1	GLYMA09G01960.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-11	44.2	292	329

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvl 35
           gHt +vt++af   d +ll+s+s Dg i vW + +g++
   Q: 292  GHTQRVTDMAFfaEDlHLLASASTDGRIFVWKINEGPD 329
           8*********9998899***************988876 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MASSSGNPNQ QQQPQPQQLQ QQNFDFNKLF KAPTTSSPSI PNPSNLNSSP SFPAPSPSTP 60
PPSSYPTPSS SYPPPTGTYP YHHPHFLPYP ALHHHHHQQQ QQQHQEHPLI LHHLPQMHAP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGATGATGGT TGCCATTGCC ATTGTTCCAA AATCCCCATC CTTTGGTAGT AGCAGCAGCT 60
ATTTTTTAAA TTGGATGATG CAAAAAGGCA AATTGTTGAT TAAACCACCT TCTTCTTCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032401--EDC4_WD40
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16529--Ge1_WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000932--C:P-body
GO:0031087--P:deadenylation-independent decapping of nuclear-transcribed mRNA

KEGG

gmx:100778070

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014578	Brachypodium distachyon	49.61	0.00e+00	1115.00
IUUC-Mac-065564	Musa acuminata	65.66	0.00e+00	691.00
IUUC-Oin-079723	Oryza indica	70.42	0.00e+00	636.00
IUUC-Sit-110590	Setaria italica	51.24	0.00e+00	1165.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence