iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017285

Ensembl Protein ID

Bra025442.1-P

UniProt Accession

M4E9I6; M4E9I6_BRARP

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra025442	Bra025442.1	Bra025442.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.00e-33	114.0	34	104

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +p+ef CpIs +lM+dPv++++Gitydr+sIekw++sg++tcPvt++ lt  d++Pn+t+r++iq wc e 
   Q: 34   IPPEFQCPISIDLMKDPVIISTGITYDRTSIEKWIDSGNNTCPVTNTVLTTFDQIPNHTIRKMIQGWCVEI 104
           8*******************************************************************875 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MGFTWGMRLR GASKKKIAPV MSWSESTSEP DITIPPEFQC PISIDLMKDP VIISTGITYD 60
RTSIEKWIDS GNNTCPVTNT VLTTFDQIPN HTIRKMIQGW CVEIGSSLIE RIPTPRVPLM 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGGCTTTA CATGGGGAAT GAGACTACGT GGAGCTAGCA AGAAGAAGAT AGCTCCGGTA 60
ATGAGTTGGT CGGAATCGAC ATCGGAGCCG GATATAACGA TTCCGCCGGA GTTTCAATGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0010200--P:response to chitin

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003111	Amborella trichopoda	38.89	3.00e-78	285.00
IUUC-Aly-006171	Arabidopsis lyrata	79.22	0.00e+00	639.00
IUUC-Ath-007692	Arabidopsis thaliana	77.63	6.00e-179	619.00
IUUC-Bdi-014644	Brachypodium distachyon	38.86	1.00e-73	270.00
IUUC-Bol-016269	Brassica oleracea	96.51	0.00e+00	817.00
IUUC-Gma-043784	Glycine max	45.39	2.00e-104	372.00
IUUC-Hvu-047616	Hordeum vulgare	36.62	4.00e-72	265.00
IUUC-Lpe-050701	Leersia perrieri	38.59	4.00e-61	228.00
IUUC-Mac-064511	Musa acuminata	38.14	1.00e-66	246.00
IUUC-Obr-076534	Oryza brachyantha	36.52	8.00e-59	220.00
IUUC-Ogl-077061	Oryza glaberrima	41.03	9.00e-32	130.00
IUUC-Ogu-078268	Oryza glumaepatula	37.86	2.00e-53	202.00
IUUC-Oin-079382	Oryza indica	38.10	5.00e-54	204.00
IUUC-Oni-082958	Oryza nivara	38.33	3.00e-54	205.00
IUUC-Osa-086217	Oryza sativa	38.10	6.00e-54	204.00
IUUC-Pop-099312	Populus trichocarpa	48.23	4.00e-106	377.00
IUUC-Ppe-101406	Prunus persica	48.19	6.00e-112	397.00
IUUC-Pyt-104721	Pyrenophora triticirepentis	39.02	3.00e-10	61.20
IUUC-Sly-111602	Solanum lycopersicum	43.18	1.00e-93	336.00
IUUC-Stu-112797	Solanum tuberosum	45.80	3.00e-95	341.00
IUUC-Tca-120967	Theobroma cacao	46.97	6.00e-90	323.00
IUUC-Tae-124576	Triticum aestivum	38.12	3.00e-66	245.00
IUUC-Vvi-131485	Vitis vinifera	47.36	2.00e-93	335.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence