iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Obr-076534

Ensembl Protein ID

OB02G38810.1

UniProt Accession

J3LGW4; J3LGW4_ORYBR

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OB02G38810	OB02G38810.1	OB02G38810.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-32	112.5	42	114

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
           +vp++flCpIsle+MrdPv++p+Gitydr  Ie wl+ g+  cPvt++pl+ e+lvPn++ rr+iq+wc +n+
   Q: 42   DVPDHFLCPISLEMMRDPVTAPTGITYDRDGIEGWLELGRGACPVTGRPLRAEELVPNHATRRMIQEWCVANR 114
           69*******************************************************************9986 PP

Organism

Oryza brachyantha

Protein Sequence
(Fasta)

MTRPRARARP GRLALFEIPL AVRRLAWRQQ QDQQTAAEGG GDVPDHFLCP ISLEMMRDPV 60
TAPTGITYDR DGIEGWLELG RGACPVTGRP LRAEELVPNH ATRRMIQEWC VANRAFGVER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGACTCGCC CTCGCGCCCG CGCCCGCCCG GGCCGGCTGG CCCTGTTCGA GATCCCGCTC 60
GCCGTGCGGC GGTTGGCTTG GCGGCAGCAG CAGGATCAGC AGACGGCGGC CGAGGGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000169	Aegilops tauschii	77.05	8.00e-97	345.00
IUUC-Atr-003111	Amborella trichopoda	43.07	8.00e-87	313.00
IUUC-Aly-006049	Arabidopsis lyrata	36.71	7.00e-61	226.00
IUUC-Ath-007695	Arabidopsis thaliana	36.47	1.00e-61	229.00
IUUC-Bdi-014644	Brachypodium distachyon	67.64	1.00e-122	432.00
IUUC-Bol-015846	Brassica oleracea	37.14	3.00e-66	244.00
IUUC-Bra-017285	Brassica rapa	37.23	5.00e-63	233.00
IUUC-Gma-043443	Glycine max	43.93	2.00e-74	271.00
IUUC-Hvu-047616	Hordeum vulgare	74.48	3.00e-156	543.00
IUUC-Lpe-050701	Leersia perrieri	63.94	1.00e-115	409.00
IUUC-Mtr-057926	Medicago truncatula	41.30	2.00e-78	285.00
IUUC-Mac-065672	Musa acuminata	47.30	3.00e-95	341.00
IUUC-Oba-075080	Oryza barthii	90.27	1.00e-110	392.00
IUUC-Ogl-077723	Oryza glaberrima	85.85	2.00e-168	584.00
IUUC-Ogu-078447	Oryza glumaepatula	85.51	3.00e-169	587.00
IUUC-Oin-079382	Oryza indica	66.82	2.00e-105	374.00
IUUC-Ome-081665	Oryza meridionalis	83.37	2.00e-178	617.00
IUUC-Oni-082092	Oryza nivara	85.85	2.00e-168	584.00
IUUC-Opu-083482	Oryza punctata	83.49	0.00e+00	652.00
IUUC-Oru-084868	Oryza rufipogon	85.85	2.00e-168	584.00
IUUC-Osa-085472	Oryza sativa	85.85	2.00e-168	584.00
IUUC-Ppa-095941	Physcomitrella patens	37.22	7.00e-57	213.00
IUUC-Pop-099887	Populus trichocarpa	44.04	3.00e-89	321.00
IUUC-Ppe-101692	Prunus persica	47.62	3.00e-87	314.00
IUUC-Smo-108932	Selaginella moellendorffii	37.56	1.00e-53	202.00
IUUC-Sit-109812	Setaria italica	75.37	5.00e-154	536.00
IUUC-Sly-111577	Solanum lycopersicum	45.02	2.00e-96	345.00
IUUC-Stu-112581	Solanum tuberosum	44.20	2.00e-88	318.00
IUUC-Sbi-114336	Sorghum bicolor	70.54	4.00e-126	443.00
IUUC-Tca-121201	Theobroma cacao	46.60	9.00e-99	352.00
IUUC-Tae-125168	Triticum aestivum	74.25	5.00e-150	523.00
IUUC-Vvi-131485	Vitis vinifera	50.23	1.00e-94	339.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence