iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Stu-112183

Ensembl Protein ID

PGSC0003DMT400040333

UniProt Accession

M1B9R4; M1B9R4_SOLTU

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PGSC0003DMG400015613	PGSC0003DMT400040333	PGSC0003DMT400040333

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.00e-31	106.4	203	240

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d v++la  sd  ll s+s+D t k+W+++++++l 
   Q: 203  HVDTVSALAIsSDnSLLYSASWDRTFKIWRISDFKCLE 240
           99*********88899******************9986 PP

Organism

Solanum tuberosum

Protein Sequence
(Fasta)

MGKIPCPLPF QSKQKSINSD QFHPIYSDLS SSSSLSLSRS SSSLYSQPSL PSVPSLTPLS 60
THSELLSNTF CASTFTGLSS SVFCLSLAGK HLYTGTSNGE IRLRNKDPLN QEKNYSIVVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTCATCTCTA AATTTGAACT GTTTCTAACC ATTTTTTCAA GCAAAAAATG GGTAAAATCC 60
CATGTCCATT GCCCTTCCAA TCTAAGCAAA AATCAATAAA TTCTGATCAA TTTCATCCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

sot:102600182

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014607	Brachypodium distachyon	46.49	3.00e-89	320.00
IUUC-Csv-026163	Ciona savignyi	25.83	5.00e-18	84.70
IUUC-Gma-043243	Glycine max	58.67	7.00e-121	426.00
IUUC-Mtr-057831	Medicago truncatula	57.14	8.00e-111	392.00
IUUC-Oba-075265	Oryza barthii	41.54	5.00e-67	247.00
IUUC-Olu-087837	Ostreococcus lucimarinus	28.80	2.00e-27	114.00
IUUC-Sly-111881	Solanum lycopersicum	86.54	0.00e+00	636.00
IUUC-Vvi-131635	Vitis vinifera	65.19	6.00e-135	472.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence