iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-049796

Ensembl Protein ID

ENSLACP00000012800.1

UniProt Accession

H3AT29; H3AT29_LATCH

Genbank Protein ID

ENSLACP00000012800

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01168087

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000011276.1	ENSLACT00000012894.1	ENSLACP00000012800.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.80e-30	102.3	283	315
UBD/Beta-Prp	5.90e-43	147.4	276	482

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gHt +v+++++   s++ll+s+s D++ik+W++
   Q: 283  GHTKGVSAIRLfpvSGHLLLSCSMDCKIKLWEV 315
           8*********55977799*************97 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkll 172
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++ ++     t+ gh+++v+ ++++  g+ + s+++Dr ++lWd +tg+++
   Q: 276  KQMHVWSGHTKGVSAIRLFPvSGHLLLSCSMDCKIKLWEVYNERRCIRTFIGHSKAVRDICYNNAGSQFLSAAYDRYLKLWDTETGQCI 364
           78999***************999****************987765555****************99*********************** PP
   S: 173  rtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllk 258
            ++t  + +  y+++f+++      +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  +     k
   Q: 365  SRFT--NRKVPYCVKFNPDEdkqSLFVAGMSDKKIVQWDIRSGEVVQEYDRHLGAVNTITFVDESRRFVSTSDDKSLRVWEWDIPVDFK 451
           ***7..588889999999888878999****************************************************9777777788 PP
   S: 259  tlqlhnssvisvavlsfgdnvlvlgsedskv 289
            ++ +  ++++  +ls++d++l+  s ds +
   Q: 452  YIAEPSMHSMPAVTLSPNDSYLYCQSLDSVF 482
           8888888888888888888888888777655 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MSAAISALAS YGSGSESEPE SEGEAEAGLS PDSTVHLRHV PATRALALAL NSAPEVAVKE 60
DVEAGVHLDP SLKEIKYNPT FDMMFAPEFT KDSPFMSTSM AMPEILIANS CKSIHLDNFF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCAAGATGTC GGCAGCAATT TCTGCTCTGG CTTCTTACGG CAGCGGCTCG GAATCCGAAC 60
CCGAGTCGGA GGGAGAAGCC GAAGCAGGGC TCAGCCCGGA TTCCACTGTG CACCTCCGCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0677--Repeat
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0016021--C:integral component of membrane
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	44.83	1.00e-119	423.00
IUUC-Aml-002243	Ailuropoda melanoleuca	78.74	0.00e+00	644.00
IUUC-Atr-002502	Amborella trichopoda	44.44	2.00e-124	439.00
IUUC-Apl-003885	Anas platyrhynchos	75.95	0.00e+00	824.00
IUUC-Aca-004854	Anolis carolinensis	58.44	4.00e-178	617.00
IUUC-Aly-006158	Arabidopsis lyrata	56.56	3.00e-121	428.00
IUUC-Ath-007474	Arabidopsis thaliana	45.15	2.00e-127	449.00
IUUC-Ago-007726	Ashbya gossypii	34.53	1.00e-59	224.00
IUUC-Acl-008220	Aspergillus clavatus	39.57	2.00e-108	385.00
IUUC-Afl-008473	Aspergillus flavus	38.07	1.00e-105	376.00
IUUC-Afu-008773	Aspergillus fumigatus	39.64	2.00e-107	382.00
IUUC-Ani-009323	Aspergillus nidulans	38.65	1.00e-91	330.00
IUUC-Ang-009851	Aspergillus niger	38.67	5.00e-107	381.00
IUUC-Aor-009950	Aspergillus oryzae	38.07	1.00e-105	376.00
IUUC-Ate-010372	Aspergillus terreus	37.86	1.00e-107	383.00
IUUC-Ame-011660	Astyanax mexicanus	75.00	0.00e+00	845.00
IUUC-Bgr-012230	Blumeria graminis	45.07	3.00e-104	372.00
IUUC-Bta-012568	Bos taurus	76.01	0.00e+00	828.00
IUUC-Bci-013646	Botrytis cinerea	49.40	3.00e-100	358.00
IUUC-Bdi-014199	Brachypodium distachyon	44.55	9.00e-120	423.00
IUUC-Bol-015695	Brassica oleracea	42.16	4.00e-130	457.00
IUUC-Bra-017923	Brassica rapa	42.39	6.00e-130	457.00
IUUC-Cel-018535	Caenorhabditis elegans	47.96	1.00e-154	539.00
IUUC-Cja-019071	Callithrix jacchus	76.56	0.00e+00	833.00
IUUC-Cfa-020559	Canis familiaris	76.19	0.00e+00	831.00
IUUC-Cpo-022356	Cavia porcellus	76.19	0.00e+00	829.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	39.07	3.00e-66	245.00
IUUC-Csa-023125	Chlorocebus sabaeus	76.56	0.00e+00	833.00
IUUC-Cho-024676	Choloepus hoffmanni	74.66	0.00e+00	795.00
IUUC-Cin-025229	Ciona intestinalis	61.39	0.00e+00	648.00
IUUC-Csv-025868	Ciona savignyi	71.28	3.00e-40	155.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	44.48	7.00e-89	321.00
IUUC-Cne-026885	Cryptococcus neoformans	45.12	8.00e-126	444.00
IUUC-Dre-027631	Danio rerio	73.01	0.00e+00	855.00
IUUC-Dno-029815	Dasypus novemcinctus	67.15	0.00e+00	753.00
IUUC-Dor-031143	Dipodomys ordii	67.03	0.00e+00	719.00
IUUC-Dse-031520	Dothistroma septosporum	41.05	2.00e-85	309.00
IUUC-Dme-032050	Drosophila melanogaster	55.80	0.00e+00	638.00
IUUC-Ete-032866	Echinops telfairi	73.63	0.00e+00	803.00
IUUC-Eca-033384	Equus caballus	76.33	0.00e+00	832.00
IUUC-Eeu-034471	Erinaceus europaeus	68.81	0.00e+00	675.00
IUUC-Fca-035727	Felis catus	76.19	0.00e+00	831.00
IUUC-Fal-036774	Ficedula albicollis	76.48	0.00e+00	836.00
IUUC-Fox-037951	Fusarium oxysporum	45.52	2.00e-105	375.00
IUUC-Fso-038287	Fusarium solani	50.87	5.00e-103	367.00
IUUC-Gmo-039670	Gadus morhua	70.93	0.00e+00	834.00
IUUC-Ggr-039764	Gaeumannomyces graminis	41.71	2.00e-93	336.00
IUUC-Gga-040293	Gallus gallus	77.03	0.00e+00	836.00
IUUC-Gac-042159	Gasterosteus aculeatus	73.24	0.00e+00	850.00
IUUC-Gma-044299	Glycine max	56.30	2.00e-118	419.00
IUUC-Ggo-044864	Gorilla gorilla	76.74	0.00e+00	834.00
IUUC-Hsa-046602	Homo sapiens	76.74	0.00e+00	834.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	84.38	0.00e+00	693.00
IUUC-Kpa-049318	Komagataella pastoris	39.54	9.00e-80	290.00
IUUC-Lpe-051153	Leersia perrieri	45.83	9.00e-123	433.00
IUUC-Loc-052467	Lepisosteus oculatus	77.47	0.00e+00	875.00
IUUC-Lma-053107	Leptosphaeria maculans	43.73	2.00e-97	348.00
IUUC-Laf-053787	Loxodonta africana	75.91	0.00e+00	857.00
IUUC-Mcc-055706	Macaca mulatta	76.56	0.00e+00	832.00
IUUC-Meu-056757	Macropus eugenii	67.87	5.00e-162	564.00
IUUC-Mor-057079	Magnaporthe oryzae	45.33	2.00e-95	342.00
IUUC-Mpo-057533	Magnaporthe poae	45.13	6.00e-95	340.00
IUUC-Mtr-057950	Medicago truncatula	55.10	7.00e-117	414.00
IUUC-Mla-058910	Melampsora laricipopulina	41.85	4.00e-122	432.00
IUUC-Mga-059366	Meleagris gallopavo	76.19	0.00e+00	834.00
IUUC-Mvi-060349	Microbotryum violaceum	53.03	3.00e-120	426.00
IUUC-Mmr-061209	Microcebus murinus	76.19	0.00e+00	863.00
IUUC-Mdo-062118	Monodelphis domestica	74.09	0.00e+00	852.00
IUUC-Mmu-063173	Mus musculus	76.19	0.00e+00	829.00
IUUC-Mac-065080	Musa acuminata	43.30	2.00e-122	432.00
IUUC-Mpu-066659	Mustela putorius furo	76.19	0.00e+00	832.00
IUUC-Mlu-067029	Myotis lucifugus	75.46	0.00e+00	809.00
IUUC-Nfi-068334	Neosartorya fischeri	40.49	4.00e-107	382.00
IUUC-Ncr-068675	Neurospora crassa	44.17	1.00e-87	316.00
IUUC-Nle-070113	Nomascus leucogenys	75.17	0.00e+00	834.00
IUUC-Opr-070685	Ochotona princeps	68.50	0.00e+00	779.00
IUUC-Ont-071680	Oreochromis niloticus	71.43	0.00e+00	847.00
IUUC-Oan-073573	Ornithorhynchus anatinus	76.30	0.00e+00	759.00
IUUC-Ocu-074074	Oryctolagus cuniculus	75.64	0.00e+00	857.00
IUUC-Oba-075625	Oryza barthii	45.20	3.00e-122	432.00
IUUC-Obr-076510	Oryza brachyantha	45.47	1.00e-122	433.00
IUUC-Ogl-077275	Oryza glaberrima	45.20	3.00e-122	432.00
IUUC-Ogu-078563	Oryza glumaepatula	45.20	2.00e-122	432.00
IUUC-Oin-079898	Oryza indica	56.14	3.00e-116	411.00
IUUC-Olo-081080	Oryza longistaminata	56.30	4.00e-116	411.00
IUUC-Oni-083121	Oryza nivara	45.20	3.00e-122	432.00
IUUC-Opu-083329	Oryza punctata	45.01	3.00e-121	428.00
IUUC-Oru-084807	Oryza rufipogon	44.31	1.00e-104	373.00
IUUC-Osa-086039	Oryza sativa	45.30	7.00e-123	434.00
IUUC-Ola-087149	Oryzias latipes	72.68	0.00e+00	830.00
IUUC-Olu-087627	Ostreococcus lucimarinus	38.85	6.00e-100	357.00
IUUC-Oga-088359	Otolemur garnettii	76.19	0.00e+00	830.00
IUUC-Oar-089390	Ovis aries	76.01	0.00e+00	827.00
IUUC-Ptr-090894	Pan troglodytes	76.74	0.00e+00	834.00
IUUC-Pan-092476	Papio anubis	76.56	0.00e+00	832.00
IUUC-Psi-093527	Pelodiscus sinensis	74.36	0.00e+00	787.00
IUUC-Pno-094771	Phaeosphaeria nodorum	42.95	8.00e-97	347.00
IUUC-Ppa-095386	Physcomitrella patens	43.88	2.00e-125	442.00
IUUC-Pfo-096139	Poecilia formosa	72.81	0.00e+00	847.00
IUUC-Pab-097838	Pongo abelii	76.04	0.00e+00	720.00
IUUC-Pop-098945	Populus trichocarpa	43.15	8.00e-124	437.00
IUUC-Pca-100876	Procavia capensis	62.09	0.00e+00	686.00
IUUC-Ppe-101777	Prunus persica	43.23	9.00e-122	430.00
IUUC-Pva-102418	Pteropus vampyrus	75.36	0.00e+00	825.00
IUUC-Pgr-103456	Puccinia graminis	45.10	8.00e-136	477.00
IUUC-Ptt-103731	Puccinia triticina	42.21	6.00e-124	437.00
IUUC-Pte-104386	Pyrenophora teres	45.27	2.00e-97	349.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	46.02	2.00e-97	349.00
IUUC-Rno-105694	Rattus norvegicus	76.01	0.00e+00	808.00
IUUC-Sce-106339	Saccharomyces cerevisiae	33.68	1.00e-63	237.00
IUUC-Sha-106709	Sarcophilus harrisii	74.54	0.00e+00	851.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	42.34	1.00e-101	363.00
IUUC-Spo-108331	Schizosaccharomyces pombe	44.98	2.00e-100	359.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	45.34	1.00e-93	336.00
IUUC-Smo-109326	Selaginella moellendorffii	38.13	2.00e-101	362.00
IUUC-Sit-110446	Setaria italica	44.05	4.00e-119	421.00
IUUC-Sly-111330	Solanum lycopersicum	55.20	9.00e-118	417.00
IUUC-Stu-112610	Solanum tuberosum	55.49	4.00e-118	418.00
IUUC-Sar-113065	Sorex araneus	67.77	8.00e-111	393.00
IUUC-Sbi-114005	Sorghum bicolor	44.42	1.00e-119	423.00
IUUC-Sre-114988	Sporisorium reilianum	44.20	2.00e-129	456.00
IUUC-Ssc-115760	Sus scrofa	76.19	0.00e+00	832.00
IUUC-Tgu-116493	Taeniopygia guttata	76.83	0.00e+00	842.00
IUUC-Tru-118489	Takifugu rubripes	71.08	0.00e+00	833.00
IUUC-Tsy-119332	Tarsius syrichta	76.37	0.00e+00	865.00
IUUC-Tni-120202	Tetraodon nigroviridis	68.67	0.00e+00	754.00
IUUC-Tca-121429	Theobroma cacao	55.69	9.00e-117	414.00
IUUC-Tre-122162	Trichoderma reesei	49.86	6.00e-104	370.00
IUUC-Tvi-122500	Trichoderma virens	49.29	8.00e-103	367.00
IUUC-Tae-125557	Triticum aestivum	44.55	5.00e-119	421.00
IUUC-Tur-126554	Triticum urartu	44.42	4.00e-117	414.00
IUUC-Tme-126919	Tuber melanosporum	41.16	1.00e-112	399.00
IUUC-Tbe-127968	Tupaia belangeri	70.62	0.00e+00	788.00
IUUC-Ttr-129215	Tursiops truncatus	74.31	0.00e+00	821.00
IUUC-Uma-129622	Ustilago maydis	42.22	1.00e-130	459.00
IUUC-Vda-129750	Verticillium dahliae	49.29	4.00e-104	371.00
IUUC-Vpa-130617	Vicugna pacos	75.24	0.00e+00	764.00
IUUC-Vvi-131238	Vitis vinifera	54.81	2.00e-115	409.00
IUUC-Xtr-131865	Xenopus tropicalis	75.55	0.00e+00	847.00
IUUC-Xma-133627	Xiphophorus maculatus	73.32	0.00e+00	851.00
IUUC-Yli-134390	Yarrowia lipolytica	48.44	2.00e-97	349.00
IUUC-Zma-135925	Zea mays	45.18	1.00e-115	410.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence