iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043064

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000844

Gene Name

LOC100812160; GLYMA_11G140100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G14910	GLYMA11G14910.1	GLYMA11G14910.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	4.30e-34	118.0	256	328

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           +p++f+CpIslelM+dPv++++G+ty+r++Iekwl+ g+ tcP+t+q+lt++ l+Pn++lr+li +wce+n++
   Q: 256  IPDDFRCPISLELMKDPVIVSTGQTYERTCIEKWLQAGHGTCPKTQQTLTSTVLTPNYVLRSLIAQWCEANGI 328
           89********************************************************************986 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MEGENASKVI ELVNEIASIS EYRPPVKKQY CNLARRLKLL IPMFEEIRDM NKDALPEDTS 60
NAVLAFKEAL QSARELLRFG SEGSKLYLVL ERDDIMNKFY EVTAQLEQSL GGISHDKLDI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCCAAGCCAA GCTGAAACGA GCCGAGCCAG TCCCATAGCA AAACTCGATC TCTTAGCTGA 60
CTCAGCTCCA GCAGCCGCCA CAAAAAGAAA ATTAGACAAC CAAAAAGCAT TACGCGTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50176--ARM_REPEAT
PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00185--ARM
SM00504--Ubox

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0004842--F:ubiquitin-protein transferase activity

KEGG

gmx:100812160

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005681	Arabidopsis lyrata	69.67	0.00e+00	891.00
IUUC-Ath-007618	Arabidopsis thaliana	69.67	0.00e+00	892.00
IUUC-Bdi-014772	Brachypodium distachyon	64.06	0.00e+00	761.00
IUUC-Bol-015254	Brassica oleracea	71.54	0.00e+00	882.00
IUUC-Bra-017857	Brassica rapa	70.91	0.00e+00	865.00
IUUC-Lpe-051284	Leersia perrieri	63.04	0.00e+00	748.00
IUUC-Mtr-058332	Medicago truncatula	85.45	0.00e+00	1145.00
IUUC-Mac-065438	Musa acuminata	60.43	0.00e+00	735.00
IUUC-Oba-075184	Oryza barthii	63.43	0.00e+00	760.00
IUUC-Obr-076590	Oryza brachyantha	62.12	0.00e+00	738.00
IUUC-Ogl-077386	Oryza glaberrima	63.43	0.00e+00	760.00
IUUC-Ogu-078326	Oryza glumaepatula	63.43	0.00e+00	759.00
IUUC-Olo-081001	Oryza longistaminata	63.43	0.00e+00	759.00
IUUC-Ome-081417	Oryza meridionalis	63.42	0.00e+00	770.00
IUUC-Opu-083774	Oryza punctata	62.94	0.00e+00	764.00
IUUC-Ppa-095383	Physcomitrella patens	51.42	5.00e-173	601.00
IUUC-Pop-098809	Populus trichocarpa	75.49	0.00e+00	1002.00
IUUC-Ppe-102057	Prunus persica	77.41	0.00e+00	878.00
IUUC-Sly-111594	Solanum lycopersicum	73.77	0.00e+00	951.00
IUUC-Stu-112876	Solanum tuberosum	73.31	0.00e+00	934.00
IUUC-Sbi-113843	Sorghum bicolor	62.32	0.00e+00	716.00
IUUC-Tca-121745	Theobroma cacao	75.23	0.00e+00	960.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence