iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ogu-078494

Ensembl Protein ID

OGLUM03G10880.1

UniProt Accession

A0A0D9Z4T9; A0A0D9Z4T9_9ORYZ

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
OGLUM03G10880	OGLUM03G10880.1	OGLUM03G10880.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.10e-20	71.2	456	491
UBD/Beta-Prp	1.20e-47	163.7	410	677

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v+++af  ++  l +++++dD+tikvW+ ++g
   Q: 456  HVGGVNDIAFahPNkQLcIITCGDDKTIKVWEATSG 491
           99*********97653359************98876 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkgheds 96
           +++  ++ + +spd++l+ +++ ++ +++++++ g+ +r+      h ++v+++ f +  k   ++t+++D+tikvw+  +g    t++ghe+ 
   Q: 410  DPTVSVNRIIWSPDGTLFGVAYSRHIVQIYSYHGGDDIRQHleiDAHVGGVNDIAFAHPNKqlCIITCGDDKTIKVWEATSGAKQFTFEGHEAP 503
           55666778899************************99665323389**********99888899****************************** PP
   S: 97   vlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsG..slDrtvrl..Wdlktgkllrtltgghtdsvy 184
           v+s+  +   + +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg+ l+s+  s+D+   l  W+ + g + rt +g  ++s  
   Q: 504  VYSVCPHYkeNIQFIFSTALDGKIKAWLYDNLGSRVDYDAP-GHWCTTMAYSADGSRLFSCgtSKDGESHLveWNESEGAVKRTYQGFRKRSMG 596
           ***855544388***************99998777756555.5699999999*9*999998334566544333999****************** PP
   S: 185  slsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlql 262
            ++fd ++++++++++   +k+wd+ +++ + t  +    + s  vrf +++++l++ ++++ i+i  + +   ll+tl++
   Q: 597  VVQFDTTRNRFLAAGDEFLIKIWDMDNTSLLTTIDADGGLPASprVRFNKEGTLLAVSTHENGIKILaNADGVRLLRTLEN 677
           **********************************9999877753377889999999999******9656655556665555 PP

Organism

Oryza glumaepatula

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFYFNMKY FEDEVINGNW DEVERYLGGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVEILVKD LKVFASFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TCTCATCCTC CTCCAGGCTC GCCCTCGTTC CTCTCTCTCT CTCCTCGCAA AGCGATCGAG 60
GCAAATCCGG AGCCGCCGCC GGGCCCTCGA TCTTCGCCGG CGGCCGCCCC CACCTCCGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	92.81	0.00e+00	2109.00
IUUC-Atr-002737	Amborella trichopoda	78.20	0.00e+00	1747.00
IUUC-Aly-005472	Arabidopsis lyrata	78.14	0.00e+00	1739.00
IUUC-Ath-007640	Arabidopsis thaliana	77.17	0.00e+00	1748.00
IUUC-Bdi-014914	Brachypodium distachyon	92.24	0.00e+00	2069.00
IUUC-Bol-015359	Brassica oleracea	77.50	0.00e+00	1737.00
IUUC-Bra-016893	Brassica rapa	77.23	0.00e+00	1736.00
IUUC-Gma-043911	Glycine max	81.49	0.00e+00	1831.00
IUUC-Hvu-047688	Hordeum vulgare	93.18	0.00e+00	1985.00
IUUC-Lpe-051514	Leersia perrieri	95.12	0.00e+00	2073.00
IUUC-Mtr-058037	Medicago truncatula	81.18	0.00e+00	1794.00
IUUC-Mac-065382	Musa acuminata	83.32	0.00e+00	1908.00
IUUC-Oba-075912	Oryza barthii	100.00	0.00e+00	2182.00
IUUC-Obr-076921	Oryza brachyantha	97.35	0.00e+00	2169.00
IUUC-Ogl-077334	Oryza glaberrima	100.00	0.00e+00	2210.00
IUUC-Oin-079720	Oryza indica	98.44	0.00e+00	2201.00
IUUC-Olo-081034	Oryza longistaminata	94.38	0.00e+00	2153.00
IUUC-Ome-081778	Oryza meridionalis	99.91	0.00e+00	2215.00
IUUC-Oni-082412	Oryza nivara	100.00	0.00e+00	2182.00
IUUC-Opu-083406	Oryza punctata	96.54	0.00e+00	2112.00
IUUC-Oru-084328	Oryza rufipogon	99.91	0.00e+00	2200.00
IUUC-Osa-085765	Oryza sativa	100.00	0.00e+00	2210.00
IUUC-Pop-098876	Populus trichocarpa	78.91	0.00e+00	1792.00
IUUC-Ppe-101370	Prunus persica	82.06	0.00e+00	1885.00
IUUC-Sit-110288	Setaria italica	92.78	0.00e+00	2062.00
IUUC-Sly-111739	Solanum lycopersicum	79.95	0.00e+00	1813.00
IUUC-Stu-112409	Solanum tuberosum	70.13	0.00e+00	1588.00
IUUC-Sbi-114078	Sorghum bicolor	92.42	0.00e+00	2058.00
IUUC-Tca-121628	Theobroma cacao	79.46	0.00e+00	1811.00
IUUC-Tae-125398	Triticum aestivum	93.66	0.00e+00	2125.00
IUUC-Tur-126412	Triticum urartu	91.28	0.00e+00	2097.00
IUUC-Vvi-131079	Vitis vinifera	80.51	0.00e+00	1812.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence