iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101370

Ensembl Protein ID

EMJ16106

UniProt Accession

M5WSC2; M5WSC2_PRUPE

Genbank Protein ID

EMJ16106.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KB639030

Gene Name

PRUPE_ppa000478mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa000478mg	EMJ16106	EMJ16106

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-21	76.1	460	495
UBD/Beta-Prp	2.20e-45	155.6	419	761

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDlrtg 33
           H ++v++laf  ++  l +++++dD+tikvWD +tg
   Q: 460  HVGGVNDLAFshPNkQLcVITCGDDKTIKVWDATTG 495
           999*******99764334699***********9998 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgsrdgtikvwdvttgkl...lrslsgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp..sg 106
           ++ v +spd+sl+ +++ ++ +++++++ g+     +++  h ++v+++ fs+  k    +t+++D+tikvwd  tg   +t++ghe+ v+s+  +   + 
   Q: 419  VNRVIWSPDGSLFGVAYSRHIVQIYSYHGGDDirqHKEIDAHVGGVNDLAFSHPNKqlCVITCGDDKTIKVWDATTGAKQYTFEGHEAPVYSVCPHYkeNI 519
           566889************************99554556789***********99888999********************************855544388 PP
   S: 107  dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl..Dr..tvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgt 203
           +++ s+  d  i+ w  ++     + +++  ++ ++++++ dg  l+s+++  D+   +  W+ + g + rt +g  ++s   ++fd ++++++++++d +
   Q: 520  QFIFSTALDGKIKAWLYDNLGSRVDYDAPG-RWCTTMAYSADGTRLFSCGTskDGesYIVEWNESEGAVKRTYQGFRKRSFGVVQFDTTKNRFLAAGDDFS 619
           ***************999988777566665.5999999*****999998652244224666999************************************* PP
   S: 204  vklwdlqtgecvrtlnghtdnvks..vrfspnderlvsgssDgsiriW.dlrsgdllktlqlhn....ssvisvavlsfgdnvl................. 280
           +k+wd+ + + + t+ +    + s  +rf +++ +l++ + ++ i++  + +   ll+t+++h     s+ + v + ++  n +                 
   Q: 620  IKFWDMDNIQLLTTVDADGGLPASprIRFNKDGSLLAVSANENGIKVLaNADGIRLLRTFENHLsydaSRTSEVVT-KPAINPIsvaaaaaaaaatsagla 719
           ***************999987775338888*****************77999999999999988888755555555.444333345566666666666666 PP
   S: 281  .........................vlgsedskvniwklkkn 297
                                    ++ ++++k +iwkl+++
   Q: 720  drsasavsisgmngdarnlgdvkprIAEESNDKSKIWKLTEI 761
           666666666666777777788887766666778888888775 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLDEEK FKETVHKLEQ ESGFFFNMKY FEDEVHNGNW DEVEKYLSGF 60
TKVDDNRYSM KIFFEIRKQK YLEALDKHDR SKAVDILVKD LKVFATFNEE LFKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAAAATTTCT GGAGAGAGAA AGAGAGTTTA CTATAAGTTT CTAGAGAGAG AAAGCTTTCT 60
CTGAGCTCTG TCTCTGTCTC TGTCTCTCTC TCTCTCTTCT TCGTCTTCTG GATGTGTGGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR027295--Quinoprotein_ADH-like_fam
IPR011047--Quinoprotein_ADH-like_supfam
IPR027728--Topless_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

Gene Ontology

GO:0006355--P:regulation of transcription, DNA-templated

KEGG

pper:PRUPE_ppa000478mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000565	Aegilops tauschii	81.18	0.00e+00	1862.00
IUUC-Atr-002737	Amborella trichopoda	79.70	0.00e+00	1797.00
IUUC-Aly-005472	Arabidopsis lyrata	84.08	0.00e+00	1901.00
IUUC-Ath-007021	Arabidopsis thaliana	84.95	0.00e+00	1923.00
IUUC-Bdi-014914	Brachypodium distachyon	80.66	0.00e+00	1826.00
IUUC-Bol-016225	Brassica oleracea	84.49	0.00e+00	1927.00
IUUC-Bra-016893	Brassica rapa	84.64	0.00e+00	1892.00
IUUC-Gma-043911	Glycine max	90.25	0.00e+00	2051.00
IUUC-Hvu-047688	Hordeum vulgare	82.15	0.00e+00	1764.00
IUUC-Lpe-051514	Leersia perrieri	79.52	0.00e+00	1748.00
IUUC-Mtr-058037	Medicago truncatula	88.88	0.00e+00	1995.00
IUUC-Mac-065003	Musa acuminata	81.56	0.00e+00	1862.00
IUUC-Oba-075912	Oryza barthii	82.26	0.00e+00	1840.00
IUUC-Obr-076921	Oryza brachyantha	81.28	0.00e+00	1833.00
IUUC-Ogl-077334	Oryza glaberrima	81.89	0.00e+00	1845.00
IUUC-Ogu-078494	Oryza glumaepatula	81.89	0.00e+00	1845.00
IUUC-Oin-079720	Oryza indica	80.78	0.00e+00	1837.00
IUUC-Olo-081034	Oryza longistaminata	78.90	0.00e+00	1806.00
IUUC-Ome-081778	Oryza meridionalis	81.80	0.00e+00	1847.00
IUUC-Oni-082412	Oryza nivara	82.40	0.00e+00	1840.00
IUUC-Opu-083406	Oryza punctata	80.94	0.00e+00	1790.00
IUUC-Oru-084328	Oryza rufipogon	81.99	0.00e+00	1839.00
IUUC-Osa-085765	Oryza sativa	81.89	0.00e+00	1845.00
IUUC-Ppa-095814	Physcomitrella patens	71.06	0.00e+00	1583.00
IUUC-Pop-098876	Populus trichocarpa	88.40	0.00e+00	2005.00
IUUC-Smo-109617	Selaginella moellendorffii	69.90	0.00e+00	1543.00
IUUC-Sit-110288	Setaria italica	80.52	0.00e+00	1813.00
IUUC-Sly-111739	Solanum lycopersicum	86.85	0.00e+00	1983.00
IUUC-Sbi-114078	Sorghum bicolor	80.96	0.00e+00	1815.00
IUUC-Tca-121628	Theobroma cacao	89.68	0.00e+00	2029.00
IUUC-Tae-125775	Triticum aestivum	81.73	0.00e+00	1873.00
IUUC-Tur-126412	Triticum urartu	80.33	0.00e+00	1845.00
IUUC-Vvi-131079	Vitis vinifera	90.47	0.00e+00	2035.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence