iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131297

Ensembl Protein ID

VIT_14s0060g01680.t01

UniProt Accession

D7U9Y9; D7U9Y9_VITVI

Genbank Protein ID

CBI39553.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN596746

Gene Name

TPR3; VIT_14s0060g01680

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_14s0060g01680	VIT_14s0060g01680.t01	VIT_14s0060g01680.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-25	89.0	452	484
UBD/Beta-Prp	3.50e-42	145.2	406	657

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tl.lvsGsdDgtikvWDl 30
           H + v+++af  ++  l +v+++dD+ ikvWD+
   Q: 452  HVGCVNDIAFahPNkQLcVVTCGDDKLIKVWDM 484
           9999*******9774344799***********5 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvwdvttgkllrsl...sgheaevtavkfspdgk..ilvtgseDrtikvwdlstgkcvhtl 90
           + + +++ v++spd++++ ++++ + i ++ +t  + lr+      h + v+++ f +  k    vt+++D++ikvwd++ +k +  +
   Q: 406  DASIPVSRVAWSPDGNFIGVAFTKHLIHLYAYTGSNELRQHleiDAHVGCVNDIAFAHPNKqlCVVTCGDDKLIKVWDMNGRKLF-NF 492
           55557888**************************999765412277888899999*988887999**************988876.79 PP
   S: 91   kghedsvlslsfsp..sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGsl....DrtvrlWdlktgkll 172
           +ghe+ v+s+  +   s +++ s+  d  i+ w  ++     + +++   + +++ ++ dg+ l+s+++    D+++  W+ + g + 
   Q: 493  EGHEAPVYSICPHHkeSIQFIFSTAMDGKIKAWLYDNIGSRVDYDAPGL-WCTTMLYSADGSRLFSCGTskdgDSFLVEWNESEGAIK 579
           *********988876555***************9999888876776666.78888888889999999764544777888999****** PP
   S: 173  rtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght..dnvksvrfspnderlvsgssDgsiri 248
           rt  g  ++s   ++fd ++++++++++d+++k+wd+ + +++ +  +      v ++rf +++++l+++++D+  +i
   Q: 580  RTYNGFRKKSAGVVQFDTTQNHFLAAGEDNQIKFWDMDNVNVLASIDADGglPSVPRLRFNKEGNLLAVTTADNGFKI 657
           *****9************************************99999987334566788889********99998776 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MSSLSRELVF LILQFLEEEK FKESVHKLEK ESGFFFNMKY FEEKVQAGEW DEVEKYLSGY 60
TKVDDNRYSM KIFFEIRKQK YLEALDRQDK AKAVEILVTD LRVFSTFNED LYKEITQLLT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GATTTGAGTT TTGTGAGGAG AAATGTCGTC TTTGAGCAGA GAATTGGTGT TCCTCATACT 60
CCAGTTTCTA GAAGAAGAGA AATTTAAGGA GTCCGTACAC AAGTGAGTAT CTTCGTGTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR006594--LisH
IPR011044--Quino_amine_DH_bsu
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00668--CTLH
SM00667--LisH
SM00320--WD40

KEGG

vvi:100261303

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000072	Aegilops tauschii	68.00	0.00e+00	1466.00
IUUC-Aly-005503	Arabidopsis lyrata	75.00	0.00e+00	1672.00
IUUC-Ath-007641	Arabidopsis thaliana	74.96	0.00e+00	1700.00
IUUC-Bdi-014677	Brachypodium distachyon	73.53	0.00e+00	1644.00
IUUC-Bol-016367	Brassica oleracea	75.33	0.00e+00	1715.00
IUUC-Bra-017100	Brassica rapa	73.81	0.00e+00	1674.00
IUUC-Gma-042940	Glycine max	81.82	0.00e+00	1881.00
IUUC-Hvu-047370	Hordeum vulgare	73.09	0.00e+00	1668.00
IUUC-Lpe-050951	Leersia perrieri	73.02	0.00e+00	1620.00
IUUC-Mtr-058168	Medicago truncatula	82.24	0.00e+00	1897.00
IUUC-Mac-064660	Musa acuminata	71.20	0.00e+00	1622.00
IUUC-Oba-075415	Oryza barthii	74.34	0.00e+00	1684.00
IUUC-Obr-076726	Oryza brachyantha	74.32	0.00e+00	1692.00
IUUC-Ogl-077810	Oryza glaberrima	74.34	0.00e+00	1684.00
IUUC-Ogu-078090	Oryza glumaepatula	74.34	0.00e+00	1684.00
IUUC-Oin-080158	Oryza indica	74.23	0.00e+00	1681.00
IUUC-Olo-080271	Oryza longistaminata	73.20	0.00e+00	1647.00
IUUC-Ome-081965	Oryza meridionalis	74.17	0.00e+00	1674.00
IUUC-Oni-082421	Oryza nivara	74.26	0.00e+00	1685.00
IUUC-Opu-083912	Oryza punctata	74.34	0.00e+00	1684.00
IUUC-Oru-085201	Oryza rufipogon	74.34	0.00e+00	1684.00
IUUC-Osa-086161	Oryza sativa	74.34	0.00e+00	1684.00
IUUC-Pop-099268	Populus trichocarpa	82.77	0.00e+00	1833.00
IUUC-Ppe-102061	Prunus persica	81.82	0.00e+00	1855.00
IUUC-Sit-110487	Setaria italica	73.67	0.00e+00	1652.00
IUUC-Sly-111169	Solanum lycopersicum	80.81	0.00e+00	1484.00
IUUC-Stu-112369	Solanum tuberosum	80.35	0.00e+00	1478.00
IUUC-Sbi-113873	Sorghum bicolor	73.93	0.00e+00	1660.00
IUUC-Tca-121768	Theobroma cacao	82.79	0.00e+00	1869.00
IUUC-Tae-125707	Triticum aestivum	73.62	0.00e+00	1666.00
IUUC-Tur-126477	Triticum urartu	69.33	0.00e+00	1629.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence