iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114885

UUCD1 version

UUC-SoB-01278

Ensembl Protein ID

Sb08g003790.1

UniProt Accession

A0A1B6PB84; A0A1B6PB84_SORBI

Genbank Protein ID

KXG23010.1

Protein Name

RING-type E3 ubiquitin transferase

Genbank Nucleotide ID

CM000767

Gene Name

SORBI_008G044300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb08g003790	Sb08g003790.1	Sb08g003790.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	7.40e-32	110.1	9	77

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           ++++CpIsl++M+dPv++p+Gitydr++Ie+wla g+ tcPvt+qpl+  dl+Pn+tlrrliq+w+  +
   Q: 9    QHLMCPISLQPMQDPVTAPTGITYDRRAIERWLAAGHATCPVTGQPLALADLTPNHTLRRLIQSWRLPS 77
           5789*************************************************************9766 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MEDLSGMRQH LMCPISLQPM QDPVTAPTGI TYDRRAIERW LAAGHATCPV TGQPLALADL 60
TPNHTLRRLI QSWRLPSSTS TPPAPDAGEA KLLADDVVEQ QQRPPEVAAA DVVVKKLLCT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGGACT TGAGCGGCAT GCGTCAACAC CTGATGTGCC CCATCTCGCT GCAGCCCATG 60
CAGGACCCCG TCACGGCGCC CACCGGCATC ACCTACGACC GCCGCGCCAT CGAGCGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000907	Aegilops tauschii	57.77	3.00e-96	344.00
IUUC-Bdi-014256	Brachypodium distachyon	48.80	9.00e-66	243.00
IUUC-Gma-043599	Glycine max	38.89	5.00e-76	277.00
IUUC-Hvu-047308	Hordeum vulgare	62.14	2.00e-126	444.00
IUUC-Lpe-050938	Leersia perrieri	45.19	6.00e-72	263.00
IUUC-Ogl-077755	Oryza glaberrima	78.38	7.00e-32	129.00
IUUC-Ogu-078503	Oryza glumaepatula	76.62	2.00e-32	131.00
IUUC-Ome-081661	Oryza meridionalis	69.68	3.00e-52	198.00
IUUC-Oni-082905	Oryza nivara	76.62	3.00e-32	132.00
IUUC-Opu-083955	Oryza punctata	84.13	8.00e-30	122.00
IUUC-Oru-084915	Oryza rufipogon	65.83	7.00e-49	187.00
IUUC-Osa-085942	Oryza sativa	65.47	1.00e-50	193.00
IUUC-Sit-110030	Setaria italica	71.79	1.00e-105	375.00
IUUC-Tae-123303	Triticum aestivum	60.04	4.00e-106	377.00
IUUC-Tur-126675	Triticum urartu	52.94	1.00e-42	166.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence