iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Csa-023414

Ensembl Protein ID

ENSCSAP00000008865.1

UniProt Accession

A0A0D9RJS6; A0A0D9RJS6_CHLSB

Genbank Protein ID

ENSCSAP00000008865

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AQIB01044243

Gene Name

WDR55

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCSAG00000012681.1	ENSCSAT00000010776.1	ENSCSAP00000008865.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.90e-24	83.1	126	157

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sdtllvsGsdDgtikvWDlrt 32
           H +++++l + +++ l++G d g i++WD r+
   Q: 126  HGAPINSLLLvDENVLATGDDTGGIRLWDQRK 157
           999*****77555****************765 PP

Organism

Chlorocebus sabaeus

Protein Sequence
(Fasta)

MDRTCEERPA EDGSDEDDPD STEAPTRIRD TPEDIVLEAP ASGLAFHPAR DLLAAGDVDG 60
DVFVFSYSCQ EGETKELWSS GHHLKACRAV AFSEDGQKLV TVSKDKAIHV LDVEQGRLER 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TACACGCAGT TCTCAACTTT ACGTGTCGTG ACTAGGGAGG GAATTGACGG TCACACAGTT 60
TACCTAGGCC AAACTGGGCC ACAGCCGGAC AAGGAAGTAG CAGATCTCTC AAGCGCGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR017422--WDR55

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

csab:103244668

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000562	Aegilops tauschii	36.64	1.00e-47	183.00
IUUC-Aml-001768	Ailuropoda melanoleuca	93.99	0.00e+00	744.00
IUUC-Atr-002764	Amborella trichopoda	35.53	2.00e-22	97.80
IUUC-Apl-003880	Anas platyrhynchos	64.03	4.00e-116	412.00
IUUC-Aca-005060	Anolis carolinensis	66.31	4.00e-150	525.00
IUUC-Aly-006484	Arabidopsis lyrata	36.15	2.00e-49	189.00
IUUC-Ath-006652	Arabidopsis thaliana	37.97	2.00e-57	215.00
IUUC-Bta-013497	Bos taurus	93.22	0.00e+00	711.00
IUUC-Bdi-014378	Brachypodium distachyon	37.91	5.00e-56	211.00
IUUC-Bol-016352	Brassica oleracea	38.31	4.00e-59	221.00
IUUC-Bra-017103	Brassica rapa	38.31	1.00e-59	223.00
IUUC-Cel-018192	Caenorhabditis elegans	25.58	3.00e-15	75.90
IUUC-Cja-018792	Callithrix jacchus	94.01	0.00e+00	710.00
IUUC-Cfa-020739	Canis familiaris	93.61	0.00e+00	712.00
IUUC-Cpo-022331	Cavia porcellus	92.43	0.00e+00	709.00
IUUC-Cre-022921	Chlamydomonas reinhardtii	39.89	6.00e-37	146.00
IUUC-Cho-024600	Choloepus hoffmanni	91.67	0.00e+00	636.00
IUUC-Cin-025565	Ciona intestinalis	38.69	3.00e-63	235.00
IUUC-Csv-026294	Ciona savignyi	39.93	2.00e-62	232.00
IUUC-Cne-026979	Cryptococcus neoformans	32.99	8.00e-41	160.00
IUUC-Cme-027192	Cyanidioschyzon merolae	26.13	4.00e-21	95.50
IUUC-Dre-028492	Danio rerio	62.78	2.00e-127	448.00
IUUC-Dno-030050	Dasypus novemcinctus	89.34	0.00e+00	642.00
IUUC-Dor-030386	Dipodomys ordii	81.82	7.00e-173	599.00
IUUC-Dse-031203	Dothistroma septosporum	24.92	4.00e-13	69.30
IUUC-Dme-032012	Drosophila melanogaster	34.49	4.00e-60	225.00
IUUC-Ete-032491	Echinops telfairi	88.80	0.00e+00	686.00
IUUC-Eca-033583	Equus caballus	95.04	0.00e+00	726.00
IUUC-Eeu-034976	Erinaceus europaeus	94.16	8.00e-177	612.00
IUUC-Fca-036417	Felis catus	90.86	0.00e+00	691.00
IUUC-Gmo-039505	Gadus morhua	65.48	5.00e-138	483.00
IUUC-Ggr-039978	Gaeumannomyces graminis	23.75	1.00e-11	63.90
IUUC-Gga-040732	Gallus gallus	69.53	2.00e-145	508.00
IUUC-Gac-041313	Gasterosteus aculeatus	63.39	4.00e-134	470.00
IUUC-Gma-044122	Glycine max	39.66	8.00e-58	217.00
IUUC-Ggo-044748	Gorilla gorilla	97.13	0.00e+00	765.00
IUUC-Hsa-046943	Homo sapiens	97.13	0.00e+00	763.00
IUUC-Hvu-047659	Hordeum vulgare	37.19	7.00e-55	207.00
IUUC-Itr-048110	Ictidomys tridecemlineatus	91.74	0.00e+00	670.00
IUUC-Lch-050331	Latimeria chalumnae	59.05	3.00e-114	404.00
IUUC-Lpe-051193	Leersia perrieri	39.44	6.00e-59	221.00
IUUC-Loc-051946	Lepisosteus oculatus	66.28	4.00e-134	471.00
IUUC-Laf-054035	Loxodonta africana	91.16	0.00e+00	684.00
IUUC-Mcc-055285	Macaca mulatta	98.92	3.00e-106	377.00
IUUC-Meu-056596	Macropus eugenii	84.07	5.00e-171	593.00
IUUC-Mor-056995	Magnaporthe oryzae	24.51	1.00e-12	67.80
IUUC-Mtr-058637	Medicago truncatula	39.73	1.00e-57	217.00
IUUC-Mga-059839	Meleagris gallopavo	66.26	4.00e-94	339.00
IUUC-Mdo-062868	Monodelphis domestica	82.60	4.00e-175	608.00
IUUC-Mmu-064305	Mus musculus	88.00	0.00e+00	675.00
IUUC-Mac-065041	Musa acuminata	38.73	3.00e-58	218.00
IUUC-Mpu-066779	Mustela putorius furo	93.68	0.00e+00	697.00
IUUC-Mlu-067223	Myotis lucifugus	92.27	0.00e+00	671.00
IUUC-Ncr-068919	Neurospora crassa	24.68	5.00e-08	52.40
IUUC-Nle-069852	Nomascus leucogenys	96.87	0.00e+00	723.00
IUUC-Ont-072452	Oreochromis niloticus	65.48	6.00e-138	483.00
IUUC-Oan-073163	Ornithorhynchus anatinus	82.07	8.00e-65	238.00
IUUC-Ocu-074628	Oryctolagus cuniculus	95.04	0.00e+00	717.00
IUUC-Oba-075868	Oryza barthii	38.73	3.00e-56	211.00
IUUC-Obr-076768	Oryza brachyantha	39.08	1.00e-57	216.00
IUUC-Ogl-077424	Oryza glaberrima	39.44	8.00e-59	220.00
IUUC-Ogu-078847	Oryza glumaepatula	39.08	1.00e-56	213.00
IUUC-Oin-079495	Oryza indica	39.44	8.00e-59	220.00
IUUC-Olo-080268	Oryza longistaminata	39.08	2.00e-56	213.00
IUUC-Ome-081709	Oryza meridionalis	38.85	4.00e-50	191.00
IUUC-Oni-082749	Oryza nivara	39.44	8.00e-59	220.00
IUUC-Opu-084023	Oryza punctata	32.75	1.00e-39	156.00
IUUC-Oru-084764	Oryza rufipogon	39.08	1.00e-56	213.00
IUUC-Osa-086009	Oryza sativa	39.44	9.00e-59	220.00
IUUC-Ola-086463	Oryzias latipes	60.99	1.00e-128	452.00
IUUC-Olu-087897	Ostreococcus lucimarinus	31.93	3.00e-43	168.00
IUUC-Oga-089114	Otolemur garnettii	91.96	0.00e+00	714.00
IUUC-Ptr-090556	Pan troglodytes	96.87	0.00e+00	762.00
IUUC-Pan-092828	Papio anubis	99.22	0.00e+00	778.00
IUUC-Psi-093609	Pelodiscus sinensis	72.92	8.00e-121	427.00
IUUC-Pma-094413	Petromyzon marinus	54.11	8.00e-102	363.00
IUUC-Ppa-095422	Physcomitrella patens	38.55	5.00e-66	244.00
IUUC-Pfo-096389	Poecilia formosa	64.29	5.00e-130	457.00
IUUC-Pab-098095	Pongo abelii	97.13	0.00e+00	768.00
IUUC-Pop-099612	Populus trichocarpa	38.52	5.00e-54	204.00
IUUC-Pca-100408	Procavia capensis	91.16	0.00e+00	680.00
IUUC-Ppe-101931	Prunus persica	35.21	7.00e-55	207.00
IUUC-Pva-102549	Pteropus vampyrus	92.84	0.00e+00	700.00
IUUC-Rno-105079	Rattus norvegicus	90.91	0.00e+00	697.00
IUUC-Sha-107299	Sarcophilus harrisii	84.37	3.00e-162	565.00
IUUC-Sja-107829	Schizosaccharomyces japonicus	28.62	2.00e-22	99.80
IUUC-Spo-108122	Schizosaccharomyces pombe	29.82	3.00e-28	119.00
IUUC-Smo-109673	Selaginella moellendorffii	38.81	2.00e-50	192.00
IUUC-Sit-110263	Setaria italica	38.38	9.00e-57	213.00
IUUC-Sly-110988	Solanum lycopersicum	37.10	2.00e-53	202.00
IUUC-Stu-112713	Solanum tuberosum	37.46	3.00e-54	205.00
IUUC-Sbi-114617	Sorghum bicolor	37.32	1.00e-54	206.00
IUUC-Sre-115136	Sporisorium reilianum	30.11	7.00e-13	68.60
IUUC-Ssc-116268	Sus scrofa	93.26	0.00e+00	728.00
IUUC-Tgu-116720	Taeniopygia guttata	61.26	2.00e-88	320.00
IUUC-Tru-117977	Takifugu rubripes	64.88	4.00e-130	457.00
IUUC-Tsy-119121	Tarsius syrichta	91.82	2.00e-118	419.00
IUUC-Tni-119904	Tetraodon nigroviridis	67.56	1.00e-132	466.00
IUUC-Tca-121718	Theobroma cacao	40.28	2.00e-59	222.00
IUUC-Tae-124364	Triticum aestivum	37.54	4.00e-55	208.00
IUUC-Tme-126922	Tuber melanosporum	23.79	3.00e-11	63.50
IUUC-Tbe-127276	Tupaia belangeri	92.59	8.00e-157	545.00
IUUC-Uma-129505	Ustilago maydis	32.52	1.00e-13	71.20
IUUC-Vpa-130276	Vicugna pacos	95.22	5.00e-141	493.00
IUUC-Vvi-131377	Vitis vinifera	39.22	2.00e-57	218.00
IUUC-Xtr-132529	Xenopus tropicalis	67.61	1.00e-147	517.00
IUUC-Xma-134177	Xiphophorus maculatus	63.99	1.00e-122	433.00
IUUC-Yli-134665	Yarrowia lipolytica	23.66	2.00e-07	50.10

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence