iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113964

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000768

Gene Name

SORBI_009G205400

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb09g026220	Sb09g026220.1	Sb09g026220.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.60e-08	34.3	131	173

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plvlp.CgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl+++++g  ++v+p C H fh++Cl +w       +++++CP+Cr
   Q: 131  CSICLCEYREGemLRVMPeCRHRFHLTCLDAW------LRRSASCPVCR 173
           ********7777799999**************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSLLDSLASL GLGYAIAIAL GFLVLLASVL LASYFCLRRG GAGDLFGPGV GVGVGSARHA 60
ASSASSSGHI SITVPRVVFV AEDYDSPGSS SRGAAAAASP VGLDPSVIAS YPRVPFSKAG 120

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Nucleotide Sequence
(Fasta)

ATGTCCCTCC TTGACTCGCT CGCCTCGCTC GGTCTCGGGT ACGCAATCGC CATCGCGCTC 60
GGCTTCCTCG TCCTCCTCGC CTCGGTGCTC CTCGCCTCCT ACTTCTGCCT CCGCCGCGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_09g026220

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005626	Arabidopsis lyrata	48.56	1.00e-33	135.00
IUUC-Ath-007050	Arabidopsis thaliana	49.52	2.00e-34	137.00
IUUC-Bdi-014271	Brachypodium distachyon	79.15	6.00e-52	196.00
IUUC-Ppe-101378	Prunus persica	53.77	6.00e-20	90.50
IUUC-Sce-106223	Saccharomyces cerevisiae	36.05	2.00e-10	57.80
IUUC-Sit-110496	Setaria italica	88.35	1.00e-49	189.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence