iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-006601

UUCD1 version

UUC-ArT-01387

Ensembl Protein ID

AT1G55530.1

UniProt Accession

Q9ZVU8; Q9ZVU8_ARATH

Genbank Protein ID

AAD10644.1; AAK62663.1; AAL11572.1; AAN18071.1; AEE33259.1; ANM59037.1

Protein Name

At1g55530/T5A14_7; RING/U-box superfamily protein; T5A14.7 protein

Genbank Nucleotide ID

AC005223; AY039608; AF424578; BT000502; CP002684; CP002684

Gene Name

At1g55530; T5A14.7; T5A14_7

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT1G55530	AT1G55530.1	AT1G55530.1
AT1G55530	AT1G55530.3	AT1G55530.3

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.80e-07	32.4	223	264

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++Cl+df   ++ +++pC H fh dCl  w         + +CP+Cr
   Q: 223  CSVCLDDFeiGTEAKLMPCTHKFHSDCLLPW------LELHSSCPVCR 264
           ********77444999***************......**********8 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MEEAVVTRYW CHMCSQTVNP VMEAEIKCPF CQSGFVEEME DDDDHDSSDP ADVRANNSLW 60
APILMELMND PVRRRRNQSV ESVEDNQNEV QTENNEDDGE NDLDWQLQEI LRRRRRHSAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTGTTGATG TTTGTAGAAA AGTCTACTGG AATTAATGAG CTGATTAAAA AAAAGGAGCA 60
GCTAATTAAG AATAAGACCC ACAGAGAGAA AAGAAATGAG AAACCCAGAA GGATCTGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001123	Aegilops tauschii	73.00	4.00e-44	171.00
IUUC-Atr-003093	Amborella trichopoda	51.93	3.00e-64	238.00
IUUC-Aly-005802	Arabidopsis lyrata	88.64	9.00e-168	582.00
IUUC-Bci-013958	Botrytis cinerea	35.42	2.00e-15	76.60
IUUC-Bdi-014620	Brachypodium distachyon	44.25	8.00e-49	186.00
IUUC-Hvu-047357	Hordeum vulgare	42.12	3.00e-48	184.00
IUUC-Lpe-051411	Leersia perrieri	64.39	8.00e-46	176.00
IUUC-Mac-065169	Musa acuminata	38.84	7.00e-47	179.00
IUUC-Oba-075441	Oryza barthii	63.08	2.00e-45	175.00
IUUC-Obr-076715	Oryza brachyantha	64.66	4.00e-47	181.00
IUUC-Ogl-077359	Oryza glaberrima	63.08	2.00e-45	175.00
IUUC-Ogu-078243	Oryza glumaepatula	62.31	5.00e-45	174.00
IUUC-Olo-080725	Oryza longistaminata	43.90	5.00e-52	197.00
IUUC-Ome-081311	Oryza meridionalis	65.38	1.00e-46	179.00
IUUC-Oni-082403	Oryza nivara	63.08	4.00e-45	174.00
IUUC-Opu-084151	Oryza punctata	44.91	7.00e-54	203.00
IUUC-Oru-085092	Oryza rufipogon	63.08	3.00e-45	174.00
IUUC-Sit-110067	Setaria italica	38.13	1.00e-44	172.00
IUUC-Stu-112771	Solanum tuberosum	52.16	6.00e-86	310.00
IUUC-Sbi-114000	Sorghum bicolor	37.87	8.00e-50	190.00
IUUC-Tur-126272	Triticum urartu	61.65	4.00e-46	178.00
IUUC-Vvi-131512	Vitis vinifera	52.58	3.00e-70	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence