iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104563

Ensembl Protein ID

EDU46735

UniProt Accession

B2W0B2; B2W0B2_PYRTR

Genbank Protein ID

EDU46735.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

DS231617

Gene Name

PTRG_03897

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03897	EDU46735	EDU46735

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	34.95	2.00e-42	171.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Pyrenophora triticirepentis

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAATDSFLHL ARPLGPAPLG AQPSTAPLNV AIQPQAVFSI LDHSLRRPAD QERVIGTLLG 60
TRSEDGTEIE IRNCYAVPHT ETAEQVEVDM DYQKSMLALH LRANPREVLV GWYATSSDLN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCCA CCGACTCTTT CCTCCATCTC GCCCGCCCCC TTGGCCCAGC TCCGCTCGGT 60
GCTCAGCCAT CGACTGCCCC GCTGAACGTC GCCATCCAAC CCCAGGTATG CGACAAATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	33.55	1.00e-39	155.00
IUUC-Aml-001527	Ailuropoda melanoleuca	35.53	7.00e-44	169.00
IUUC-Atr-002686	Amborella trichopoda	37.11	5.00e-39	152.00
IUUC-Apl-003977	Anas platyrhynchos	34.21	1.00e-37	147.00
IUUC-Aca-004335	Anolis carolinensis	34.19	7.00e-44	169.00
IUUC-Aly-005945	Arabidopsis lyrata	36.13	5.00e-41	159.00
IUUC-Ath-007045	Arabidopsis thaliana	35.04	5.00e-40	155.00
IUUC-Acl-008365	Aspergillus clavatus	78.18	7.00e-146	508.00
IUUC-Afl-008742	Aspergillus flavus	76.70	3.00e-140	489.00
IUUC-Afu-009030	Aspergillus fumigatus	78.83	1.00e-147	513.00
IUUC-Ani-009212	Aspergillus nidulans	78.96	2.00e-148	516.00
IUUC-Ang-009712	Aspergillus niger	76.87	3.00e-143	499.00
IUUC-Aor-009885	Aspergillus oryzae	76.70	4.00e-145	505.00
IUUC-Ate-010315	Aspergillus terreus	77.52	2.00e-139	486.00
IUUC-Ame-010801	Astyanax mexicanus	44.21	2.00e-18	84.00
IUUC-Bgr-011982	Blumeria graminis	68.06	1.00e-128	451.00
IUUC-Bta-012804	Bos taurus	35.42	2.00e-44	171.00
IUUC-Bci-013891	Botrytis cinerea	73.16	7.00e-132	461.00
IUUC-Bdi-014328	Brachypodium distachyon	32.98	2.00e-36	144.00
IUUC-Bol-015446	Brassica oleracea	36.36	8.00e-43	165.00
IUUC-Bra-016862	Brassica rapa	36.36	9.00e-43	165.00
IUUC-Cel-018171	Caenorhabditis elegans	25.68	3.00e-27	113.00
IUUC-Cja-019335	Callithrix jacchus	35.53	6.00e-44	169.00
IUUC-Cfa-020138	Canis familiaris	35.53	6.00e-44	169.00
IUUC-Cpo-022109	Cavia porcellus	35.00	4.00e-38	150.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	34.95	4.00e-46	176.00
IUUC-Csa-023994	Chlorocebus sabaeus	35.53	6.00e-44	169.00
IUUC-Cho-024351	Choloepus hoffmanni	27.84	6.00e-22	96.30
IUUC-Cin-025801	Ciona intestinalis	36.33	2.00e-48	184.00
IUUC-Csv-025805	Ciona savignyi	34.89	2.00e-45	174.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	62.78	1.00e-114	404.00
IUUC-Cne-026868	Cryptococcus neoformans	34.30	4.00e-43	166.00
IUUC-Cme-027328	Cyanidioschyzon merolae	25.16	2.00e-13	67.80
IUUC-Dre-028085	Danio rerio	35.77	1.00e-46	177.00
IUUC-Dno-030099	Dasypus novemcinctus	35.53	9.00e-44	169.00
IUUC-Dor-030324	Dipodomys ordii	31.87	3.00e-33	133.00
IUUC-Dse-031314	Dothistroma septosporum	80.56	2.00e-154	536.00
IUUC-Dme-031926	Drosophila melanogaster	31.18	1.00e-38	151.00
IUUC-Ete-032569	Echinops telfairi	32.99	2.00e-38	150.00
IUUC-Eca-033502	Equus caballus	33.33	4.00e-41	160.00
IUUC-Eeu-034883	Erinaceus europaeus	27.37	4.00e-13	65.90
IUUC-Fca-035873	Felis catus	35.53	8.00e-44	169.00
IUUC-Fal-036921	Ficedula albicollis	36.03	9.00e-47	178.00
IUUC-Fox-037765	Fusarium oxysporum	62.99	2.00e-112	397.00
IUUC-Fso-038240	Fusarium solani	63.31	4.00e-114	402.00
IUUC-Gmo-038864	Gadus morhua	35.53	1.00e-45	174.00
IUUC-Ggr-039862	Gaeumannomyces graminis	59.02	8.00e-101	358.00
IUUC-Gga-040952	Gallus gallus	36.03	2.00e-46	177.00
IUUC-Gac-041677	Gasterosteus aculeatus	33.22	1.00e-45	174.00
IUUC-Gma-043061	Glycine max	36.20	1.00e-38	151.00
IUUC-Ggo-045591	Gorilla gorilla	35.53	5.00e-44	169.00
IUUC-Hsa-046860	Homo sapiens	35.53	6.00e-44	169.00
IUUC-Hvu-047410	Hordeum vulgare	29.93	6.00e-18	81.30
IUUC-Itr-048211	Ictidomys tridecemlineatus	35.53	9.00e-44	169.00
IUUC-Lch-049410	Latimeria chalumnae	33.96	2.00e-25	107.00
IUUC-Lpe-051102	Leersia perrieri	34.33	2.00e-38	150.00
IUUC-Loc-052016	Lepisosteus oculatus	31.52	5.00e-32	129.00
IUUC-Lma-053157	Leptosphaeria maculans	93.75	0.00e+00	624.00
IUUC-Laf-054568	Loxodonta africana	35.53	1.00e-43	168.00
IUUC-Mcc-054613	Macaca mulatta	35.53	5.00e-44	169.00
IUUC-Meu-056832	Macropus eugenii	30.71	1.00e-15	74.30
IUUC-Mor-057104	Magnaporthe oryzae	59.15	3.00e-106	376.00
IUUC-Mtr-058445	Medicago truncatula	36.23	4.00e-47	179.00
IUUC-Mla-059038	Melampsora laricipopulina	41.03	2.00e-55	207.00
IUUC-Mga-059548	Meleagris gallopavo	34.60	1.00e-40	157.00
IUUC-Mvi-060520	Microbotryum violaceum	35.67	2.00e-39	154.00
IUUC-Mdo-062376	Monodelphis domestica	35.40	1.00e-44	171.00
IUUC-Mmu-063254	Mus musculus	35.53	1.00e-43	168.00
IUUC-Mac-065635	Musa acuminata	35.40	5.00e-40	155.00
IUUC-Mpu-066314	Mustela putorius furo	35.53	6.00e-44	169.00
IUUC-Mlu-067512	Myotis lucifugus	35.16	5.00e-44	169.00
IUUC-Nfi-068262	Neosartorya fischeri	78.83	1.00e-147	514.00
IUUC-Ncr-068872	Neurospora crassa	61.18	1.00e-101	361.00
IUUC-Nle-070118	Nomascus leucogenys	35.53	7.00e-44	169.00
IUUC-Opr-071228	Ochotona princeps	33.61	9.00e-39	151.00
IUUC-Ont-072600	Oreochromis niloticus	35.90	7.00e-47	178.00
IUUC-Oan-073584	Ornithorhynchus anatinus	35.02	1.00e-39	154.00
IUUC-Ocu-074542	Oryctolagus cuniculus	35.53	4.00e-44	169.00
IUUC-Oba-075923	Oryza barthii	33.91	7.00e-41	159.00
IUUC-Obr-076313	Oryza brachyantha	34.80	1.00e-40	157.00
IUUC-Ogl-076932	Oryza glaberrima	33.91	7.00e-41	159.00
IUUC-Ogu-078152	Oryza glumaepatula	33.91	7.00e-41	159.00
IUUC-Oin-079528	Oryza indica	33.91	7.00e-41	159.00
IUUC-Olo-080401	Oryza longistaminata	33.91	7.00e-41	159.00
IUUC-Ome-081553	Oryza meridionalis	33.91	5.00e-41	159.00
IUUC-Oni-082090	Oryza nivara	33.91	3.00e-41	160.00
IUUC-Opu-083583	Oryza punctata	34.46	6.00e-39	152.00
IUUC-Oru-084492	Oryza rufipogon	33.91	7.00e-41	159.00
IUUC-Osa-085383	Oryza sativa	33.91	7.00e-41	159.00
IUUC-Ola-086835	Oryzias latipes	36.26	5.00e-47	179.00
IUUC-Olu-087716	Ostreococcus lucimarinus	27.84	2.00e-23	100.00
IUUC-Oga-088886	Otolemur garnettii	35.53	3.00e-44	170.00
IUUC-Oar-090079	Ovis aries	35.42	2.00e-44	171.00
IUUC-Ptr-091457	Pan troglodytes	35.53	6.00e-44	169.00
IUUC-Pan-092317	Papio anubis	32.11	3.00e-22	96.30
IUUC-Psi-093129	Pelodiscus sinensis	34.34	4.00e-41	160.00
IUUC-Pma-094488	Petromyzon marinus	35.35	1.00e-50	191.00
IUUC-Pno-095049	Phaeosphaeria nodorum	95.86	0.00e+00	625.00
IUUC-Ppa-095341	Physcomitrella patens	37.73	1.00e-51	194.00
IUUC-Pfo-096286	Poecilia formosa	35.09	1.00e-45	174.00
IUUC-Pab-097765	Pongo abelii	35.53	6.00e-44	169.00
IUUC-Pop-099131	Populus trichocarpa	36.14	5.00e-44	169.00
IUUC-Pca-100524	Procavia capensis	27.73	4.00e-21	93.20
IUUC-Ppe-101934	Prunus persica	37.96	4.00e-49	186.00
IUUC-Pva-102577	Pteropus vampyrus	35.16	1.00e-43	168.00
IUUC-Pgr-103521	Puccinia graminis	35.74	4.00e-50	189.00
IUUC-Pte-104304	Pyrenophora teres	99.36	0.00e+00	641.00
IUUC-Rno-105717	Rattus norvegicus	35.53	5.00e-44	169.00
IUUC-Sha-107190	Sarcophilus harrisii	35.85	3.00e-44	170.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	52.67	5.00e-90	322.00
IUUC-Spo-108355	Schizosaccharomyces pombe	51.97	3.00e-91	326.00
IUUC-Smo-109374	Selaginella moellendorffii	38.57	1.00e-52	198.00
IUUC-Sit-110119	Setaria italica	33.58	2.00e-39	154.00
IUUC-Sly-111570	Solanum lycopersicum	31.50	2.00e-34	137.00
IUUC-Stu-112308	Solanum tuberosum	33.07	1.00e-40	157.00
IUUC-Sar-113515	Sorex araneus	33.33	3.00e-06	43.10
IUUC-Sbi-114605	Sorghum bicolor	33.57	5.00e-40	156.00
IUUC-Sre-114906	Sporisorium reilianum	46.53	4.00e-65	239.00
IUUC-Tgu-117087	Taeniopygia guttata	35.00	5.00e-40	155.00
IUUC-Tru-117700	Takifugu rubripes	34.25	3.00e-46	176.00
IUUC-Tni-120470	Tetraodon nigroviridis	35.53	5.00e-47	179.00
IUUC-Tca-121109	Theobroma cacao	36.97	2.00e-39	154.00
IUUC-Tre-122095	Trichoderma reesei	62.99	6.00e-112	395.00
IUUC-Tvi-122580	Trichoderma virens	62.99	6.00e-112	395.00
IUUC-Tae-125129	Triticum aestivum	35.74	7.00e-43	165.00
IUUC-Tur-126658	Triticum urartu	31.15	6.00e-35	139.00
IUUC-Tme-127043	Tuber melanosporum	69.28	1.00e-126	444.00
IUUC-Tbe-127927	Tupaia belangeri	35.53	7.00e-44	169.00
IUUC-Ttr-129231	Tursiops truncatus	35.53	5.00e-44	169.00
IUUC-Uma-129578	Ustilago maydis	47.22	1.00e-65	241.00
IUUC-Vda-129730	Verticillium dahliae	59.75	3.00e-115	406.00
IUUC-Vvi-130968	Vitis vinifera	35.34	6.00e-44	169.00
IUUC-Xtr-132203	Xenopus tropicalis	37.13	2.00e-47	180.00
IUUC-Xma-133972	Xiphophorus maculatus	35.53	4.00e-45	172.00
IUUC-Yli-134553	Yarrowia lipolytica	47.33	1.00e-72	264.00
IUUC-Zma-134941	Zea mays	33.21	1.00e-34	138.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence