iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129730

Ensembl Protein ID

EGY17800

UniProt Accession

G2WUK9; G2WUK9_VERDV

Genbank Protein ID

EGY17800.1

Protein Name

Eukaryotic translation initiation factor 3 subunit F

Genbank Nucleotide ID

DS572696

Gene Name

VDAG_01482

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_01482	EGY17800	EGY17800

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
DUB/JAMM	32.36	2.00e-35	147.00	IUUC-Hsa-046860

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Verticillium dahliae

Functional Description
(View)

Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.

Protein Sequence
(Fasta)

MAVESEKFLH LSRPIVPATA SLQGNIAPLN VNIQPQAILS ILDHAVRRDI NDTQSTRVIG 60
ALVGTRSEDG MEVEVRSCFA IPHTENEDQV EVDVDYQKNM LALTLKASPR ESLLGWYTTS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGTAG AATCCGAGAA GTTCCTTCAC CTTTCGAGGC CCATCGTGCC TGCGACGGCG 60
AGCCTCCAGG GCAACATTGC CCCGCTCAAC GTCAATATCC AGCCTCAGGT ACGTGCGACC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0396--Initiation factor
KW-0648--Protein biosynthesis
KW-1185--Reference proteome

Interpro

IPR027531--eIF3f
IPR000555--JAMM/MPN+_dom
IPR024969--Rpn11/EIF3F_C

Pfam

PF01398--JAB
PF13012--MitMem_reg

SMART

SM00232--JAB_MPN

Gene Ontology

GO:0005829--C:cytosol
GO:0016282--C:eukaryotic 43S preinitiation complex
GO:0033290--C:eukaryotic 48S preinitiation complex
GO:0071540--C:eukaryotic translation initiation factor 3 complex, eIF3e
GO:0071541--C:eukaryotic translation initiation factor 3 complex, eIF3m
GO:0005634--C:nucleus
GO:0003743--F:translation initiation factor activity
GO:0001731--P:formation of translation preinitiation complex
GO:0006446--P:regulation of translational initiation

KEGG

vda:VDAG_01482

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001150	Aegilops tauschii	29.43	5.00e-28	116.00
IUUC-Aml-001527	Ailuropoda melanoleuca	32.25	1.00e-37	148.00
IUUC-Atr-002686	Amborella trichopoda	32.50	1.00e-26	111.00
IUUC-Apl-003977	Anas platyrhynchos	31.58	4.00e-34	135.00
IUUC-Aca-004335	Anolis carolinensis	31.64	3.00e-38	150.00
IUUC-Aly-005945	Arabidopsis lyrata	32.97	2.00e-32	130.00
IUUC-Ath-007045	Arabidopsis thaliana	32.25	2.00e-31	127.00
IUUC-Acl-008365	Aspergillus clavatus	59.42	5.00e-109	385.00
IUUC-Afl-008742	Aspergillus flavus	59.11	2.00e-106	376.00
IUUC-Afu-009030	Aspergillus fumigatus	61.04	5.00e-112	395.00
IUUC-Ani-009212	Aspergillus nidulans	62.30	7.00e-116	408.00
IUUC-Ang-009712	Aspergillus niger	60.39	3.00e-110	389.00
IUUC-Aor-009885	Aspergillus oryzae	59.11	3.00e-112	396.00
IUUC-Ate-010315	Aspergillus terreus	61.56	3.00e-106	376.00
IUUC-Ame-010801	Astyanax mexicanus	28.21	2.00e-24	103.00
IUUC-Bgr-011982	Blumeria graminis	68.17	4.00e-130	455.00
IUUC-Bta-012804	Bos taurus	32.61	4.00e-38	150.00
IUUC-Bci-013891	Botrytis cinerea	71.75	7.00e-131	458.00
IUUC-Bdi-014328	Brachypodium distachyon	29.68	8.00e-28	115.00
IUUC-Bol-015446	Brassica oleracea	32.86	3.00e-33	133.00
IUUC-Bra-016862	Brassica rapa	32.86	5.00e-33	132.00
IUUC-Cel-018171	Caenorhabditis elegans	27.40	1.00e-27	114.00
IUUC-Cja-019335	Callithrix jacchus	32.25	1.00e-37	148.00
IUUC-Cfa-020138	Canis familiaris	32.25	7.00e-38	149.00
IUUC-Cpo-022109	Cavia porcellus	31.80	5.00e-31	126.00
IUUC-Cre-022664	Chlamydomonas reinhardtii	32.06	9.00e-38	148.00
IUUC-Csa-023994	Chlorocebus sabaeus	32.25	1.00e-37	148.00
IUUC-Cho-024351	Choloepus hoffmanni	24.28	1.00e-14	72.40
IUUC-Cin-025801	Ciona intestinalis	30.90	5.00e-41	159.00
IUUC-Csv-025805	Ciona savignyi	29.24	7.00e-38	149.00
IUUC-Cgl-026643	Colletotrichum gloeosporioides	87.10	7.00e-160	554.00
IUUC-Cne-026868	Cryptococcus neoformans	35.25	5.00e-41	159.00
IUUC-Cme-027328	Cyanidioschyzon merolae	24.05	1.00e-12	65.50
IUUC-Dre-028085	Danio rerio	31.41	3.00e-38	150.00
IUUC-Dno-030099	Dasypus novemcinctus	31.88	3.00e-37	147.00
IUUC-Dor-030324	Dipodomys ordii	27.54	1.00e-25	108.00
IUUC-Dse-031314	Dothistroma septosporum	60.82	3.00e-116	409.00
IUUC-Dme-031926	Drosophila melanogaster	26.33	3.00e-30	123.00
IUUC-Ete-032569	Echinops telfairi	30.71	8.00e-34	135.00
IUUC-Eca-033502	Equus caballus	31.60	1.00e-35	142.00
IUUC-Eeu-034883	Erinaceus europaeus	22.63	2.00e-10	56.60
IUUC-Fca-035873	Felis catus	32.25	1.00e-37	148.00
IUUC-Fal-036921	Ficedula albicollis	33.09	3.00e-41	159.00
IUUC-Fox-037765	Fusarium oxysporum	79.87	5.00e-145	505.00
IUUC-Fso-038240	Fusarium solani	81.88	1.00e-148	517.00
IUUC-Gmo-038864	Gadus morhua	30.21	2.00e-38	150.00
IUUC-Ggr-039862	Gaeumannomyces graminis	72.90	2.00e-128	450.00
IUUC-Gga-040952	Gallus gallus	33.09	4.00e-41	159.00
IUUC-Gac-041677	Gasterosteus aculeatus	30.43	3.00e-37	146.00
IUUC-Gma-043061	Glycine max	31.79	1.00e-24	105.00
IUUC-Ggo-045591	Gorilla gorilla	32.25	1.00e-37	148.00
IUUC-Hsa-046860	Homo sapiens	32.25	1.00e-37	148.00
IUUC-Hvu-047410	Hordeum vulgare	27.81	3.00e-14	68.90
IUUC-Itr-048211	Ictidomys tridecemlineatus	32.97	8.00e-38	149.00
IUUC-Kpa-049184	Komagataella pastoris	33.33	2.40e-01	27.30
IUUC-Lch-049410	Latimeria chalumnae	38.57	2.00e-21	94.00
IUUC-Lpe-051102	Leersia perrieri	30.00	4.00e-26	109.00
IUUC-Loc-052016	Lepisosteus oculatus	28.42	6.00e-27	112.00
IUUC-Lma-053157	Leptosphaeria maculans	59.63	2.00e-115	406.00
IUUC-Laf-054568	Loxodonta africana	31.88	2.00e-37	147.00
IUUC-Mcc-054613	Macaca mulatta	32.25	1.00e-37	148.00
IUUC-Meu-056832	Macropus eugenii	27.56	6.00e-13	65.50
IUUC-Mor-057104	Magnaporthe oryzae	73.23	4.00e-137	479.00
IUUC-Mtr-058445	Medicago truncatula	31.41	1.00e-34	138.00
IUUC-Mla-059038	Melampsora laricipopulina	36.42	2.00e-44	171.00
IUUC-Mga-059548	Meleagris gallopavo	32.49	9.00e-37	144.00
IUUC-Mvi-060520	Microbotryum violaceum	28.38	9.00e-26	108.00
IUUC-Mmr-060577	Microcebus murinus	28.30	3.00e-08	50.80
IUUC-Mdo-062376	Monodelphis domestica	32.49	2.00e-39	154.00
IUUC-Mmu-063254	Mus musculus	32.25	1.00e-37	148.00
IUUC-Mac-065635	Musa acuminata	31.94	5.00e-31	126.00
IUUC-Mpu-066314	Mustela putorius furo	32.25	9.00e-38	148.00
IUUC-Mlu-067512	Myotis lucifugus	33.33	4.00e-39	153.00
IUUC-Nfi-068262	Neosartorya fischeri	60.71	1.00e-111	394.00
IUUC-Ncr-068872	Neurospora crassa	73.79	7.00e-127	444.00
IUUC-Nle-070118	Nomascus leucogenys	32.25	1.00e-37	148.00
IUUC-Opr-071228	Ochotona princeps	31.15	5.00e-34	135.00
IUUC-Ont-072600	Oreochromis niloticus	30.80	2.00e-38	150.00
IUUC-Oan-073584	Ornithorhynchus anatinus	32.91	6.00e-36	142.00
IUUC-Ocu-074542	Oryctolagus cuniculus	32.25	7.00e-38	149.00
IUUC-Oba-075923	Oryza barthii	29.71	1.00e-27	115.00
IUUC-Obr-076313	Oryza brachyantha	30.37	2.00e-28	117.00
IUUC-Ogl-076932	Oryza glaberrima	29.71	1.00e-27	115.00
IUUC-Ogu-078152	Oryza glumaepatula	29.71	1.00e-27	115.00
IUUC-Oin-079528	Oryza indica	29.71	1.00e-27	115.00
IUUC-Olo-080401	Oryza longistaminata	29.71	1.00e-27	115.00
IUUC-Ome-081553	Oryza meridionalis	29.71	8.00e-28	115.00
IUUC-Oni-082090	Oryza nivara	28.91	4.00e-28	116.00
IUUC-Opu-083583	Oryza punctata	30.37	2.00e-27	114.00
IUUC-Oru-084492	Oryza rufipogon	29.71	1.00e-27	115.00
IUUC-Osa-085383	Oryza sativa	29.71	1.00e-27	115.00
IUUC-Ola-086835	Oryzias latipes	30.80	3.00e-38	149.00
IUUC-Olu-087716	Ostreococcus lucimarinus	26.42	6.00e-20	89.00
IUUC-Oga-088886	Otolemur garnettii	32.25	7.00e-38	149.00
IUUC-Oar-090079	Ovis aries	32.61	3.00e-38	150.00
IUUC-Ptr-091457	Pan troglodytes	32.25	1.00e-37	148.00
IUUC-Pan-092317	Papio anubis	26.32	1.00e-16	78.20
IUUC-Psi-093129	Pelodiscus sinensis	32.53	4.00e-36	143.00
IUUC-Pma-094488	Petromyzon marinus	30.93	1.00e-40	157.00
IUUC-Pno-095049	Phaeosphaeria nodorum	61.34	6.00e-117	412.00
IUUC-Ppa-095341	Physcomitrella patens	30.64	2.00e-39	154.00
IUUC-Pfo-096286	Poecilia formosa	29.69	7.00e-38	149.00
IUUC-Pab-097765	Pongo abelii	32.25	1.00e-37	148.00
IUUC-Pop-099131	Populus trichocarpa	32.14	7.00e-33	132.00
IUUC-Pca-100524	Procavia capensis	24.79	3.00e-18	83.20
IUUC-Ppe-101934	Prunus persica	33.33	7.00e-38	149.00
IUUC-Pva-102577	Pteropus vampyrus	32.97	2.00e-38	151.00
IUUC-Pgr-103521	Puccinia graminis	32.37	1.00e-36	145.00
IUUC-Pte-104304	Pyrenophora teres	61.09	2.00e-115	406.00
IUUC-Pyt-104563	Pyrenophora triticirepentis	61.09	4.00e-115	405.00
IUUC-Rno-105717	Rattus norvegicus	32.25	1.00e-37	148.00
IUUC-Sha-107190	Sarcophilus harrisii	32.84	2.00e-38	150.00
IUUC-Sja-107918	Schizosaccharomyces japonicus	45.98	3.00e-80	289.00
IUUC-Spo-108355	Schizosaccharomyces pombe	44.52	2.00e-78	283.00
IUUC-Smo-109374	Selaginella moellendorffii	34.89	2.00e-42	163.00
IUUC-Sit-110119	Setaria italica	30.43	1.00e-28	118.00
IUUC-Sly-111570	Solanum lycopersicum	28.74	2.00e-24	104.00
IUUC-Stu-112308	Solanum tuberosum	29.64	3.00e-31	126.00
IUUC-Sar-113515	Sorex araneus	27.16	2.10e-02	30.00
IUUC-Sbi-114605	Sorghum bicolor	30.43	4.00e-29	120.00
IUUC-Sre-114906	Sporisorium reilianum	41.96	4.00e-58	216.00
IUUC-Tgu-117087	Taeniopygia guttata	31.76	1.00e-35	140.00
IUUC-Tru-117700	Takifugu rubripes	32.25	2.00e-39	153.00
IUUC-Tni-120470	Tetraodon nigroviridis	31.88	2.00e-39	153.00
IUUC-Tca-121109	Theobroma cacao	31.51	2.00e-26	110.00
IUUC-Tre-122095	Trichoderma reesei	80.00	1.00e-143	501.00
IUUC-Tvi-122580	Trichoderma virens	80.65	4.00e-145	505.00
IUUC-Tae-125129	Triticum aestivum	30.80	3.00e-30	123.00
IUUC-Tur-126658	Triticum urartu	28.04	3.00e-24	103.00
IUUC-Tme-127043	Tuber melanosporum	53.75	1.00e-97	347.00
IUUC-Tbe-127927	Tupaia belangeri	32.25	1.00e-37	148.00
IUUC-Ttr-129231	Tursiops truncatus	32.61	4.00e-38	150.00
IUUC-Uma-129578	Ustilago maydis	41.61	2.00e-57	214.00
IUUC-Vpa-130606	Vicugna pacos	28.30	1.00e-07	48.50
IUUC-Vvi-130968	Vitis vinifera	32.50	8.00e-32	128.00
IUUC-Xtr-132203	Xenopus tropicalis	31.27	2.00e-39	154.00
IUUC-Xma-133972	Xiphophorus maculatus	30.07	2.00e-37	147.00
IUUC-Yli-134553	Yarrowia lipolytica	41.26	5.00e-60	222.00
IUUC-Zma-134941	Zea mays	29.71	7.00e-25	105.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence