iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017297

Ensembl Protein ID

Bra014298.1-P

UniProt Accession

M4DCT1; M4DCT1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra014298	Bra014298.1	Bra014298.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	9.00e-62	210.2	105	478
ULD/UDP/UBQ/UBQ_Other	4.20e-10	40.4	26	73

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefs.....gyeqqDa 92
           Gl NlgNtCYmNS++QcL ++pel+++l + ++ + + ++ ++++  l+ + ++lf  l +++ +avsp++++ +l+k+ ++fs       +qqDa
   Q: 105  GLVNLGNTCYMNSTVQCLKSVPELKSALSN-YSLAGRSNDVDQTSHMLTVATRELFGDL-DRSVNAVSPTQFWMVLRKKFPQFSqlqngMHMQQDA 198
           9*****************************.888878888899999*************.99**********************9999889***** PP
   S: 93   qEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkkeslq 188
           +E++++ll +l+++l                       +  + ++ ++ ++ lF++ l+s++ c+e +++ss++e+ ++l+++++ + +     l+
   Q: 199  EECWTQLLYTLSQSL-----------------------KAPTSSEDSDAVKALFGVNLRSRVHCQESGEESSETESVYSLKCHISHEVN----HLH 267
           ***************.......................3467788899*************************************9986....688 PP
   S: 189  dcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfcts................. 267
           + L++  k e le      ++   +     k+  +++lP++L++++ Rf +++e++++ ki +kv++pleLd+   c++                 
   Q: 268  EGLKHGLKGE-LE----KTSPALGRTAVYLKESLIDSLPRYLTVQFVRFFWKRETNQKAKILRKVDYPLELDIYDLCSEdlrkkleaprqklrdee 358
           8887766665.44....478999999999**************************************************77777766666666666 PP
   S: 268  ..............peekqke....................................kkkYeLiavvvHsG.slssGHYvayvknekgkWllfdDs 312
                               +                                    + +Y+L++v+ H+G s++sGHYva+vk+e+gkW+++dDs
   Q: 359  gkklglqtkssskdG-----DvkmtdaeapsnesgesstaaqqegaggsssekgthmTGIYDLVSVLTHKGrSADSGHYVAWVKQESGKWIQYDDS 449
           666666555555550.....0555555555555555666666667777777777777*************************************** PP
   S: 313  kVtevkeeevleetg....staYvlfYkr 337
           + ++ +ee++ + +g    + aY+ +Yk 
   Q: 450  YPSVQREEDITKLSGggdwHMAYIIMYKA 478
           ************988************97 PP

ULD/UDP/UBQ/UBQ_Other

   S: 25   eLKekiekklgippeqqrLiykGkiLeddktLadyglkdgstihllek 72
           ++K ++++++g+ppe+q++++kG +L+dd ++++ g+kdg++++++ +
   Q: 26   VFKAQLYDLTGVPPERQKIMVKGGLLKDDADWSAIGVKDGQKLMMMGT 73
           589******************************************976 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MLTVSVKWQK KVFEGIEIDV TLPPYVFKAQ LYDLTGVPPE RQKIMVKGGL LKDDADWSAI 60
GVKDGQKLMM MGTADEIVKA PEKAIVFAED LPEEEQATNL GYSAGLVNLG NTCYMNSTVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCTCACAG GTTCTCTCTT CTCTTTCGAT TTCTTGTCGG TGGTACTCTA GTTTGGAACC 60
GGATCTTGTT TTGTCGTTCT CTCTGTGAGA ACGAATGTGA TTAAAAGAGT GTTAAAGGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR019954--Ubiquitin_CS
IPR000626--Ubiquitin_dom
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00299--UBIQUITIN_1
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00240--ubiquitin
PF00443--UCH

SMART

SM00213--UBQ

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000893	Aegilops tauschii	52.02	1.00e-80	293.00
IUUC-Atr-002725	Amborella trichopoda	75.16	0.00e+00	703.00
IUUC-Apl-004031	Anas platyrhynchos	41.92	1.00e-110	393.00
IUUC-Aca-004361	Anolis carolinensis	41.07	2.00e-110	392.00
IUUC-Aly-006078	Arabidopsis lyrata	92.16	0.00e+00	869.00
IUUC-Ath-007623	Arabidopsis thaliana	91.34	0.00e+00	863.00
IUUC-Ago-007796	Ashbya gossypii	33.05	1.00e-61	229.00
IUUC-Acl-008258	Aspergillus clavatus	37.81	7.00e-83	301.00
IUUC-Afl-008732	Aspergillus flavus	38.23	2.00e-86	313.00
IUUC-Afu-008755	Aspergillus fumigatus	38.23	2.00e-84	306.00
IUUC-Ani-009148	Aspergillus nidulans	37.94	7.00e-85	307.00
IUUC-Ang-009878	Aspergillus niger	36.99	3.00e-83	302.00
IUUC-Aor-010239	Aspergillus oryzae	38.23	2.00e-86	313.00
IUUC-Ate-010243	Aspergillus terreus	37.88	5.00e-85	308.00
IUUC-Ame-011327	Astyanax mexicanus	27.22	1.00e-42	167.00
IUUC-Bci-013606	Botrytis cinerea	37.59	5.00e-85	308.00
IUUC-Bdi-014567	Brachypodium distachyon	68.61	0.00e+00	658.00
IUUC-Bol-015565	Brassica oleracea	98.76	0.00e+00	959.00
IUUC-Cre-022663	Chlamydomonas reinhardtii	42.77	1.00e-99	356.00
IUUC-Cin-025198	Ciona intestinalis	36.83	4.00e-81	295.00
IUUC-Csv-026007	Ciona savignyi	36.00	5.00e-81	294.00
IUUC-Cme-027240	Cyanidioschyzon merolae	35.50	2.00e-68	252.00
IUUC-Dre-027647	Danio rerio	42.15	8.00e-112	397.00
IUUC-Dor-030886	Dipodomys ordii	35.63	8.00e-76	277.00
IUUC-Dme-032079	Drosophila melanogaster	38.40	1.00e-93	337.00
IUUC-Eca-033461	Equus caballus	42.43	4.00e-115	407.00
IUUC-Eeu-035220	Erinaceus europaeus	34.02	3.00e-46	179.00
IUUC-Fal-037528	Ficedula albicollis	41.68	4.00e-108	384.00
IUUC-Fox-037805	Fusarium oxysporum	38.22	7.00e-89	320.00
IUUC-Fso-038177	Fusarium solani	38.55	7.00e-87	314.00
IUUC-Gmo-038953	Gadus morhua	40.81	4.00e-102	364.00
IUUC-Ggr-039972	Gaeumannomyces graminis	36.18	5.00e-77	281.00
IUUC-Gga-040462	Gallus gallus	41.92	2.00e-110	392.00
IUUC-Gma-043255	Glycine max	74.49	0.00e+00	743.00
IUUC-Ggo-045458	Gorilla gorilla	36.76	4.00e-85	308.00
IUUC-Hvu-047821	Hordeum vulgare	69.33	4.00e-98	350.00
IUUC-Lpe-051419	Leersia perrieri	67.57	0.00e+00	632.00
IUUC-Lma-053177	Leptosphaeria maculans	41.98	4.00e-73	268.00
IUUC-Mor-057171	Magnaporthe oryzae	36.07	2.00e-79	289.00
IUUC-Mpo-057415	Magnaporthe poae	37.36	9.00e-82	297.00
IUUC-Mtr-057901	Medicago truncatula	75.93	0.00e+00	753.00
IUUC-Mga-060016	Meleagris gallopavo	41.32	4.00e-109	388.00
IUUC-Mvi-060562	Microbotryum violaceum	30.95	6.00e-66	244.00
IUUC-Mac-064876	Musa acuminata	68.19	3.00e-178	617.00
IUUC-Mlu-067866	Myotis lucifugus	43.03	2.00e-112	399.00
IUUC-Nfi-068393	Neosartorya fischeri	38.98	6.00e-85	308.00
IUUC-Ncr-068815	Neurospora crassa	37.68	6.00e-86	311.00
IUUC-Nle-070121	Nomascus leucogenys	48.15	1.00e-58	219.00
IUUC-Ont-071544	Oreochromis niloticus	41.25	1.00e-100	359.00
IUUC-Ola-086998	Oryzias latipes	41.28	5.00e-103	367.00
IUUC-Olu-087818	Ostreococcus lucimarinus	41.10	8.00e-91	327.00
IUUC-Psi-093458	Pelodiscus sinensis	41.56	2.00e-102	365.00
IUUC-Pma-094343	Petromyzon marinus	39.02	2.00e-52	199.00
IUUC-Pno-095109	Phaeosphaeria nodorum	35.98	2.00e-79	289.00
IUUC-Ppa-095756	Physcomitrella patens	62.05	5.00e-169	587.00
IUUC-Pfo-096514	Poecilia formosa	41.05	9.00e-100	357.00
IUUC-Pop-099221	Populus trichocarpa	77.80	0.00e+00	716.00
IUUC-Pca-100791	Procavia capensis	32.19	2.00e-56	212.00
IUUC-Ppe-101812	Prunus persica	78.81	0.00e+00	734.00
IUUC-Pva-102462	Pteropus vampyrus	38.81	1.00e-85	309.00
IUUC-Pte-104109	Pyrenophora teres	36.62	6.00e-84	304.00
IUUC-Pyt-104766	Pyrenophora triticirepentis	35.60	1.00e-81	296.00
IUUC-Sce-106168	Saccharomyces cerevisiae	33.82	2.00e-64	239.00
IUUC-Sja-107769	Schizosaccharomyces japonicus	35.32	1.00e-77	283.00
IUUC-Smo-109276	Selaginella moellendorffii	64.66	4.00e-176	610.00
IUUC-Sly-110965	Solanum lycopersicum	73.87	0.00e+00	717.00
IUUC-Sbi-114778	Sorghum bicolor	68.12	0.00e+00	647.00
IUUC-Sre-115011	Sporisorium reilianum	38.31	2.00e-63	236.00
IUUC-Tgu-117063	Taeniopygia guttata	41.48	4.00e-108	384.00
IUUC-Tru-118381	Takifugu rubripes	40.67	3.00e-101	361.00
IUUC-Tni-119941	Tetraodon nigroviridis	41.72	1.00e-97	349.00
IUUC-Tca-121246	Theobroma cacao	78.40	0.00e+00	744.00
IUUC-Tae-125484	Triticum aestivum	67.78	0.00e+00	649.00
IUUC-Ttr-128701	Tursiops truncatus	39.26	2.00e-80	292.00
IUUC-Uma-129657	Ustilago maydis	32.19	4.00e-76	278.00
IUUC-Vda-129723	Verticillium dahliae	35.89	9.00e-76	277.00
IUUC-Vpa-130284	Vicugna pacos	28.82	1.00e-31	130.00
IUUC-Vvi-131037	Vitis vinifera	78.47	0.00e+00	759.00
IUUC-Xtr-132235	Xenopus tropicalis	40.52	3.00e-107	382.00
IUUC-Xma-133840	Xiphophorus maculatus	41.45	3.00e-103	368.00
IUUC-Yli-134453	Yarrowia lipolytica	39.88	3.00e-88	318.00
IUUC-Zma-135791	Zea mays	60.41	1.00e-156	545.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence