iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014631

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000881

Gene Name

LOC100832326; BRADI_2g55650

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI2G55650	BRADI2G55650.1	BRADI2G55650.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.50e-36	121.1	50	86
UBD/Beta-Prp	7.10e-60	203.3	3	235

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H ++v++++f  + +l+vsG+dD +ikvW+++t+++l
   Q: 50   HDGPVRGVHFhKTqPLFVSGGDDYKIKVWNYKTHRCL 86
           99*********4459********************98 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvl 98
           t +++++++++ v+f+p +++++++  +g ++ wd+++g+ll ++ +h+++v+ v f+++++++v+g++D+ ikvw+++t  c+ tl+gh d+++
   Q: 3    TKFETKSNRVKGVAFHPRRPWILASLHSGVVQMWDYRMGTLLNRFDEHDGPVRGVHFHKTQPLFVSGGDDYKIKVWNYKTHRCLFTLHGHLDYIR 97
           67889999*************************************************************************************** PP
   S: 99   slsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl..........................k 167
           +++f+ +  ++vs+s+d+tir+w++++++c+  +l+gh++ v c+++hp+++l+vs+slD+tvr+Wd+                           
   Q: 98   TVQFHDEHPWIVSASDDQTIRIWNWQSRTCVA-VLTGHNHYVICASFHPKEDLVVSASLDQTVRVWDIgalrkksvspaddimrltqmntdmfgG 191
           ********************************.********************************************999999777766666664 PP
   S: 168  tgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqt 211
            + +++   +gh++ v++ sf+++ + +vsg++d++vklw +  
   Q: 192  IDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNG 235
           44444444555******************************953 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MLTKFETKSN RVKGVAFHPR RPWILASLHS GVVQMWDYRM GTLLNRFDEH DGPVRGVHFH 60
KTQPLFVSGG DDYKIKVWNY KTHRCLFTLH GHLDYIRTVQ FHDEHPWIVS ASDDQTIRIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCCACCTGA CCGCCCTCCT TCCCTCTCCC ACGCCAGTGG GTGGGTTTAT AGTGGTGCCG 60
TCGCCGGAGA GGATAGGAAG GGCTGGCCGT CCAAGGCGGC GGCGGCGAGA TGCTGACCAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0006888--P:ER to Golgi vesicle-mediated transport
GO:0006891--P:intra-Golgi vesicle-mediated transport
GO:0006886--P:intracellular protein transport
GO:0006890--P:retrograde vesicle-mediated transport, Golgi to ER

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence