iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043224

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000846

Gene Name

GLYMA_13G052000

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G06840	GLYMA13G06840.3	GLYMA13G06840.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.40e-08	36.0	177	217

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplv.lpCgHvfhadClqkwpglknssskefrCPlC 45
           C++Cle++  ++ p++ + C H+fh+ C++ w        ++++CP+C
   Q: 177  CPTCLEEYtkEN-PKImTKCSHHFHLGCIYEW------MERSDNCPVC 217
           ********7444.665277*************......********** PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGSVCCCLSF DDFEDYVNPN SPVYRNCVCL SCLIQNLLIV YSSIFRRGDA HSIPSSIQGA 60
ASITSAASLD NSLSDMYRSP PRPLPYDAEP RYFRSQRDGL VSRREKGSSH SNEETEPLRS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAAGAGGG TGTCTTTAAT TTCACAGTTT CATAGCAATT ATCGACAAAA AATCCAAAAT 60
TTCCACTCAC ATCTCTCTTT GTTTATGACA TCTCAAACAT TTATCTACTC TCTACCCACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR024766--Znf_RING_H2

PROSITE

PS50089--ZF_RING_2

Pfam

PF12678--zf-rbx1

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014305	Brachypodium distachyon	49.78	2.00e-57	215.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence