iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-014741

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100838909; BRADI_3g13210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G13210	BRADI3G13210.1	BRADI3G13210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.40e-14	54.5	491	536

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 4    ClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           C  C+++++d+  +  C+ C+e++H  C+ ++  ++ p+ + w+Cp+C+
   Q: 491  CRCCFKNKDDK-DIALCDGCDEAYHIYCMTPK-RTCIPKGQ-WYCPSCS 536
           88899999865.6*******************.*******7.******7 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MSASQDGASR PPVPPKRRAP ETPGGSSGGG VLTYTRKRRR AASRADGGAS SDPGQSSAAM 60
MLYGGNSRQD GHPMLARHWI TWKNTLEGYL QAPGINKGGG IHSCICDALR YNRCQSEQQG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCCGCCT CCCAGGACGG CGCCAGCCGG CCGCCGGTCC CGCCCAAGCG CCGCGCCCCG 60
GAGACCCCCG GCGGAAGCAG CGGCGGCGGC GTCCTCACTT ACACGCGCAA GCGCCGCCGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50016--ZF_PHD_2

Pfam

PF00628--PHD

SMART

SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0008270--F:zinc ion binding
GO:0048586--P:regulation of long-day photoperiodism, flowering

KEGG

bdi:100838909

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000842	Aegilops tauschii	75.39	0.00e+00	674.00
IUUC-Atr-003036	Amborella trichopoda	30.73	1.00e-37	150.00
IUUC-Aly-005677	Arabidopsis lyrata	31.93	1.00e-52	201.00
IUUC-Ath-007282	Arabidopsis thaliana	30.24	4.00e-51	194.00
IUUC-Bol-016121	Brassica oleracea	30.26	1.00e-46	180.00
IUUC-Bra-018006	Brassica rapa	32.11	7.00e-52	197.00
IUUC-Gma-044138	Glycine max	33.74	1.00e-62	233.00
IUUC-Hvu-047140	Hordeum vulgare	71.96	0.00e+00	753.00
IUUC-Lpe-051590	Leersia perrieri	58.28	3.00e-149	521.00
IUUC-Mtr-058493	Medicago truncatula	29.76	6.00e-53	201.00
IUUC-Mac-065361	Musa acuminata	43.55	1.00e-100	359.00
IUUC-Oba-075978	Oryza barthii	59.81	9.00e-172	595.00
IUUC-Obr-076162	Oryza brachyantha	58.53	4.00e-165	573.00
IUUC-Ogu-078286	Oryza glumaepatula	59.61	2.00e-171	594.00
IUUC-Oin-079536	Oryza indica	59.61	8.00e-171	592.00
IUUC-Olo-081087	Oryza longistaminata	59.19	1.00e-171	596.00
IUUC-Ome-081892	Oryza meridionalis	59.14	1.00e-170	592.00
IUUC-Oni-082124	Oryza nivara	59.42	1.00e-170	592.00
IUUC-Opu-084017	Oryza punctata	60.42	2.00e-172	598.00
IUUC-Oru-084542	Oryza rufipogon	59.42	3.00e-170	590.00
IUUC-Osa-086025	Oryza sativa	59.42	3.00e-170	590.00
IUUC-Psi-092932	Pelodiscus sinensis	41.03	2.00e-12	68.20
IUUC-Pop-099385	Populus trichocarpa	31.86	9.00e-58	217.00
IUUC-Ppe-101709	Prunus persica	30.89	3.00e-60	226.00
IUUC-Sit-110064	Setaria italica	53.45	2.00e-156	545.00
IUUC-Sly-111296	Solanum lycopersicum	35.29	3.00e-62	232.00
IUUC-Sbi-113816	Sorghum bicolor	53.71	2.00e-140	492.00
IUUC-Tca-120988	Theobroma cacao	32.20	5.00e-67	248.00
IUUC-Tae-124906	Triticum aestivum	74.52	0.00e+00	775.00
IUUC-Tur-126151	Triticum urartu	76.52	0.00e+00	672.00
IUUC-Vvi-130984	Vitis vinifera	33.00	1.00e-61	229.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence