iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cre-022799

Ensembl Protein ID

EDP05718

UniProt Accession

A8IHG8; A8IHG8_CHLRE

Genbank Protein ID

EDP05718.1

Protein Name

Subunit of the VPS-C complex

Genbank Nucleotide ID

DS496117

Gene Name

VPS18; CHLREDRAFT_195538

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CHLREDRAFT_195538	EDP05718	EDP05718

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	29.52	5.00e-25	114.00	IUUC-Hsa-046635

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Chlamydomonas reinhardtii

Protein Sequence
(Fasta)

MDLVEAFGAR NTGPGYGAEV IERLESGASG DLVIIDAPSN GAGGSEAPQL FIDTAIRQAS 60
RGRGAVTCVT ASNDVVLVAT ARGYLLRYSW DENGNERVAE VEVVPAKQQA DHRIAHLFMD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGATTTGG TCGAGGCATT CGGGGCTCGC AACACCGGGC CTGGGTATGG CGCCGAGGTC 60
ATAGAGCGGC TGGAGAGCGG AGCATCGGGT GACCTGGTCA TTATAGATGC GCCATCCAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR007810--Pep3_Vps18
IPR011990--TPR-like_helical_dom

Pfam

PF05131--Pep3_Vps18

Gene Ontology

GO:0005768--C:endosome
GO:0030897--C:HOPS complex
GO:0030674--F:protein binding, bridging
GO:0007032--P:endosome organization
GO:0007040--P:lysosome organization
GO:0035542--P:regulation of SNARE complex assembly
GO:0006904--P:vesicle docking involved in exocytosis

KEGG

cre:CHLREDRAFT_195538

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000419	Aegilops tauschii	29.52	8.00e-65	240.00
IUUC-Aml-001240	Ailuropoda melanoleuca	30.15	5.00e-37	148.00
IUUC-Atr-003125	Amborella trichopoda	31.10	2.00e-78	285.00
IUUC-Apl-004181	Anas platyrhynchos	27.67	4.00e-38	151.00
IUUC-Aca-004437	Anolis carolinensis	28.29	5.00e-42	164.00
IUUC-Aly-006046	Arabidopsis lyrata	30.20	7.00e-77	280.00
IUUC-Ath-006932	Arabidopsis thaliana	29.67	4.00e-74	271.00
IUUC-Ago-007800	Ashbya gossypii	21.27	2.00e-24	105.00
IUUC-Acl-008035	Aspergillus clavatus	24.60	5.00e-32	131.00
IUUC-Afl-008714	Aspergillus flavus	24.72	2.00e-28	119.00
IUUC-Afu-009063	Aspergillus fumigatus	24.12	2.00e-33	135.00
IUUC-Ani-009384	Aspergillus nidulans	24.41	3.00e-31	129.00
IUUC-Ang-009507	Aspergillus niger	24.89	3.00e-30	125.00
IUUC-Aor-010094	Aspergillus oryzae	24.72	5.00e-28	118.00
IUUC-Ate-010421	Aspergillus terreus	25.65	3.00e-32	132.00
IUUC-Ame-011797	Astyanax mexicanus	23.93	6.00e-51	194.00
IUUC-Bgr-012107	Blumeria graminis	24.26	6.00e-38	150.00
IUUC-Bta-012339	Bos taurus	26.13	2.00e-45	176.00
IUUC-Bci-013895	Botrytis cinerea	26.53	3.00e-45	175.00
IUUC-Bdi-014554	Brachypodium distachyon	29.02	1.00e-74	273.00
IUUC-Bol-015270	Brassica oleracea	29.67	6.00e-72	264.00
IUUC-Bra-017424	Brassica rapa	31.05	9.00e-76	276.00
IUUC-Cel-018455	Caenorhabditis elegans	24.34	2.00e-15	76.30
IUUC-Cja-019629	Callithrix jacchus	28.70	2.00e-37	149.00
IUUC-Cfa-020425	Canis familiaris	29.72	7.00e-37	147.00
IUUC-Cpo-021349	Cavia porcellus	30.00	2.00e-38	152.00
IUUC-Csa-023559	Chlorocebus sabaeus	28.91	2.00e-37	149.00
IUUC-Cho-024862	Choloepus hoffmanni	24.44	2.00e-07	49.30
IUUC-Cin-025599	Ciona intestinalis	27.33	6.00e-38	150.00
IUUC-Csv-026152	Ciona savignyi	25.29	6.00e-52	197.00
IUUC-Cgl-026551	Colletotrichum gloeosporioides	25.31	6.00e-34	137.00
IUUC-Cne-026907	Cryptococcus neoformans	25.08	6.00e-34	138.00
IUUC-Dre-027747	Danio rerio	25.34	4.00e-48	185.00
IUUC-Dno-029668	Dasypus novemcinctus	29.78	2.00e-37	149.00
IUUC-Dor-030404	Dipodomys ordii	28.98	6.00e-38	151.00
IUUC-Dse-031345	Dothistroma septosporum	24.45	5.00e-33	134.00
IUUC-Dme-031711	Drosophila melanogaster	28.49	3.00e-35	142.00
IUUC-Ete-032308	Echinops telfairi	29.48	4.00e-38	151.00
IUUC-Eca-033637	Equus caballus	30.00	1.00e-38	153.00
IUUC-Eeu-035151	Erinaceus europaeus	29.69	5.00e-38	151.00
IUUC-Fca-035585	Felis catus	29.93	6.00e-37	147.00
IUUC-Fal-037122	Ficedula albicollis	29.05	1.00e-37	150.00
IUUC-Fox-038030	Fusarium oxysporum	23.45	1.00e-33	136.00
IUUC-Fso-038426	Fusarium solani	23.78	2.00e-32	132.00
IUUC-Gmo-038784	Gadus morhua	24.64	3.00e-50	192.00
IUUC-Ggr-039973	Gaeumannomyces graminis	26.72	2.00e-41	162.00
IUUC-Gga-040692	Gallus gallus	27.67	2.00e-38	152.00
IUUC-Gac-041868	Gasterosteus aculeatus	25.33	3.00e-52	198.00
IUUC-Gma-044274	Glycine max	29.90	3.00e-74	271.00
IUUC-Ggo-045053	Gorilla gorilla	28.91	8.00e-37	147.00
IUUC-Hsa-046635	Homo sapiens	28.91	8.00e-37	147.00
IUUC-Hvu-047361	Hordeum vulgare	31.02	1.00e-73	270.00
IUUC-Itr-048868	Ictidomys tridecemlineatus	29.57	3.00e-37	148.00
IUUC-Kpa-049270	Komagataella pastoris	20.32	1.00e-18	87.00
IUUC-Lch-050188	Latimeria chalumnae	25.27	2.00e-44	172.00
IUUC-Lpe-051026	Leersia perrieri	28.99	7.00e-78	283.00
IUUC-Loc-051821	Lepisosteus oculatus	25.59	1.00e-46	179.00
IUUC-Lma-053178	Leptosphaeria maculans	26.11	9.00e-44	169.00
IUUC-Laf-053552	Loxodonta africana	29.57	5.00e-38	151.00
IUUC-Mcc-054667	Macaca mulatta	28.91	9.00e-37	147.00
IUUC-Meu-056422	Macropus eugenii	29.28	5.00e-38	151.00
IUUC-Mor-056981	Magnaporthe oryzae	26.65	1.00e-40	160.00
IUUC-Mtr-058703	Medicago truncatula	28.54	6.00e-72	264.00
IUUC-Mla-059088	Melampsora laricipopulina	28.38	2.00e-46	178.00
IUUC-Mga-059798	Meleagris gallopavo	27.67	2.00e-38	152.00
IUUC-Mvi-060404	Microbotryum violaceum	27.95	3.00e-53	202.00
IUUC-Mmr-061630	Microcebus murinus	29.57	1.00e-37	149.00
IUUC-Mdo-062354	Monodelphis domestica	26.14	4.00e-45	175.00
IUUC-Mmu-063199	Mus musculus	29.57	6.00e-38	151.00
IUUC-Mac-065595	Musa acuminata	29.48	6.00e-77	280.00
IUUC-Mpu-066596	Mustela putorius furo	29.35	3.00e-38	152.00
IUUC-Mlu-067455	Myotis lucifugus	29.57	1.00e-37	150.00
IUUC-Nfi-068565	Neosartorya fischeri	23.82	1.00e-31	129.00
IUUC-Ncr-068748	Neurospora crassa	26.18	6.00e-41	161.00
IUUC-Nle-068979	Nomascus leucogenys	32.53	3.00e-34	139.00
IUUC-Opr-070711	Ochotona princeps	29.76	1.00e-37	150.00
IUUC-Ont-072603	Oreochromis niloticus	25.18	1.00e-52	199.00
IUUC-Oan-073136	Ornithorhynchus anatinus	28.17	9.00e-36	142.00
IUUC-Ocu-074496	Oryctolagus cuniculus	29.78	1.00e-37	149.00
IUUC-Oba-075933	Oryza barthii	27.85	4.00e-64	238.00
IUUC-Obr-076290	Oryza brachyantha	29.11	6.00e-78	283.00
IUUC-Ogu-078728	Oryza glumaepatula	27.85	3.00e-64	238.00
IUUC-Oin-079954	Oryza indica	27.53	4.00e-64	238.00
IUUC-Olo-081033	Oryza longistaminata	26.10	1.00e-48	186.00
IUUC-Ome-081797	Oryza meridionalis	28.09	5.00e-65	241.00
IUUC-Oni-082802	Oryza nivara	27.85	3.00e-64	238.00
IUUC-Opu-083595	Oryza punctata	27.90	6.00e-74	270.00
IUUC-Oru-084199	Oryza rufipogon	27.85	3.00e-64	238.00
IUUC-Osa-085349	Oryza sativa	28.57	3.00e-75	275.00
IUUC-Ola-087482	Oryzias latipes	25.48	2.00e-51	196.00
IUUC-Olu-087797	Ostreococcus lucimarinus	34.45	2.00e-27	116.00
IUUC-Oga-088817	Otolemur garnettii	29.35	8.00e-38	150.00
IUUC-Oar-090350	Ovis aries	26.63	3.00e-25	108.00
IUUC-Ptr-090999	Pan troglodytes	28.91	6.00e-37	147.00
IUUC-Pan-092704	Papio anubis	28.91	9.00e-37	147.00
IUUC-Psi-093529	Pelodiscus sinensis	27.71	4.00e-39	155.00
IUUC-Pma-094400	Petromyzon marinus	24.74	1.00e-42	166.00
IUUC-Pno-094875	Phaeosphaeria nodorum	25.81	3.00e-45	175.00
IUUC-Ppa-095231	Physcomitrella patens	32.13	1.00e-74	273.00
IUUC-Pfo-096967	Poecilia formosa	23.90	2.00e-51	195.00
IUUC-Pab-098300	Pongo abelii	29.13	2.00e-37	149.00
IUUC-Pop-098966	Populus trichocarpa	30.94	3.00e-81	294.00
IUUC-Pca-100643	Procavia capensis	30.71	8.00e-37	147.00
IUUC-Ppe-101589	Prunus persica	30.96	4.00e-80	291.00
IUUC-Pva-102766	Pteropus vampyrus	30.35	7.00e-37	147.00
IUUC-Pgr-103330	Puccinia graminis	26.62	5.00e-51	194.00
IUUC-Ptt-103809	Puccinia triticina	25.29	3.00e-44	172.00
IUUC-Pte-104319	Pyrenophora teres	25.96	3.00e-42	165.00
IUUC-Pyt-104798	Pyrenophora triticirepentis	24.63	4.00e-30	125.00
IUUC-Rno-105817	Rattus norvegicus	29.57	2.00e-38	152.00
IUUC-Sce-106255	Saccharomyces cerevisiae	17.75	1.00e-15	77.00
IUUC-Sha-107479	Sarcophilus harrisii	26.14	2.00e-44	172.00
IUUC-Sja-107976	Schizosaccharomyces japonicus	24.79	2.00e-30	125.00
IUUC-Spo-108146	Schizosaccharomyces pombe	20.24	2.00e-23	102.00
IUUC-Ssl-108663	Sclerotinia sclerotiorum	26.38	3.00e-40	158.00
IUUC-Smo-109585	Selaginella moellendorffii	30.54	3.00e-64	238.00
IUUC-Sit-110275	Setaria italica	29.46	1.00e-76	280.00
IUUC-Sly-111073	Solanum lycopersicum	30.41	5.00e-71	261.00
IUUC-Stu-112392	Solanum tuberosum	22.22	5.00e-06	42.40
IUUC-Sar-113718	Sorex araneus	27.97	6.00e-35	141.00
IUUC-Sbi-114080	Sorghum bicolor	29.53	3.00e-79	288.00
IUUC-Sre-115160	Sporisorium reilianum	25.31	4.00e-40	159.00
IUUC-Ssc-115997	Sus scrofa	30.00	2.00e-38	152.00
IUUC-Tgu-116904	Taeniopygia guttata	27.86	2.00e-39	156.00
IUUC-Tru-117946	Takifugu rubripes	24.03	6.00e-54	204.00
IUUC-Tni-119692	Tetraodon nigroviridis	24.16	2.00e-51	196.00
IUUC-Tca-121455	Theobroma cacao	30.54	8.00e-76	276.00
IUUC-Tre-122128	Trichoderma reesei	25.24	2.00e-41	162.00
IUUC-Tvi-122657	Trichoderma virens	25.57	1.00e-40	160.00
IUUC-Tae-125953	Triticum aestivum	30.88	8.00e-73	266.00
IUUC-Tur-126110	Triticum urartu	29.33	6.00e-60	224.00
IUUC-Tme-127173	Tuber melanosporum	31.74	2.00e-37	149.00
IUUC-Ttr-128420	Tursiops truncatus	26.26	1.00e-44	173.00
IUUC-Uma-129580	Ustilago maydis	24.97	6.00e-42	164.00
IUUC-Vda-129790	Verticillium dahliae	23.13	1.00e-26	113.00
IUUC-Vvi-131095	Vitis vinifera	32.57	7.00e-74	270.00
IUUC-Xtr-131906	Xenopus tropicalis	23.73	3.00e-42	165.00
IUUC-Xma-134197	Xiphophorus maculatus	25.33	3.00e-52	198.00
IUUC-Yli-134617	Yarrowia lipolytica	23.47	4.00e-37	148.00
IUUC-Zma-134979	Zea mays	30.68	1.00e-72	266.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence