iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bdi-015017

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000882

Gene Name

LOC100845400; BRADI_3g16210

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
BRADI3G16210	BRADI3G16210.1	BRADI3G16210.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-08	35.8	249	290

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCle  k+ p+v+pCgH+f+  Cl++w    +  s +  CP+C+
   Q: 249  CNICLEAAKE-PVVTPCGHMFCWPCLYQW---LHGRSVHPVCPVCK 290
           99******99.999***************...556899999****6 PP

Organism

Brachypodium distachyon

Protein Sequence
(Fasta)

MAGEEPVEGS QSRSRMDLNL TQLPRPLGQL GGAIDCLELA KLQELPIAEV PRTGEVAGLQ 60
APEETPLQPA VYSSSNALSM PELPTPELSL IDPMIIEWID NLTTNSGEGL DVGEPAAVPA 120

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Nucleotide Sequence
(Fasta)

ATGGCGGGGG AGGAGCCCGT GGAGGGAAGC CAGAGTAGGA GTCGGATGGA TCTGAACCTC 60
ACACAATTGC CGCGGCCTCT AGGACAGCTG GGAGGGGCTA TTGATTGTTT GGAGCTGGCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4

SMART

SM00184--RING

Gene Ontology

GO:0036513--C:Derlin-1 retrotranslocation complex
GO:1904264--F:ubiquitin protein ligase activity involved in ERAD pathway
GO:0044390--F:ubiquitin-like protein conjugating enzyme binding
GO:0008270--F:zinc ion binding
GO:0071712--P:ER-associated misfolded protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

bdi:100845400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Mla-059070	Melampsora laricipopulina	32.88	3.00e-07	47.80
IUUC-Spo-108248	Schizosaccharomyces pombe	40.00	5.00e-08	51.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence