iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Olo-080350

Ensembl Protein ID

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
KN539100.1_FG012	KN539100.1_FGT012	KN539100.1_FGP012

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	7.20e-08	33.4	126	168

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdg..plv.lpCgHvfhadClqkwpglknssskefrCPlCr 46
           Ca+ l+df  g  +++ + C H+fh+ C+  w       + + +CP+Cr
   Q: 126  CAVSLSDFAAGdaLRLlTVCRHAFHTPCIDSW------LRAHTTCPVCR 168
           9999999944433444177*************......**********8 PP

Organism

Oryza longistaminata

Protein Sequence
(Fasta)

MAAPARRLLL LNHEPTTTPA SSSSSSRQSF PTLLPVFILF VLLLCFLSIF LVRDLLHFLS 60
LCLRRRRLLL LRHGEDHDSS SVSMQSSASP INAQAPRKPP GLDPAILASF PTLRFKASAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCGC CCGCGCGCCG CCTCCTCCTC CTCAACCACG AACCCACCAC CACCCCCGCT 60
TCGTCTTCCT CGAGTTCGAG GCAATCCTTC CCCACGCTGC TCCCGGTCTT TATCCTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-005915	Arabidopsis lyrata	45.16	3.00e-19	87.40
IUUC-Ath-006837	Arabidopsis thaliana	44.09	3.00e-18	84.30
IUUC-Bdi-014022	Brachypodium distachyon	75.00	3.00e-22	97.40
IUUC-Bol-016098	Brassica oleracea	43.62	8.00e-19	87.80
IUUC-Bra-017310	Brassica rapa	34.57	1.00e-20	93.20
IUUC-Lpe-051176	Leersia perrieri	61.24	2.00e-28	118.00
IUUC-Mac-065297	Musa acuminata	58.23	1.00e-20	91.70
IUUC-Ogl-077109	Oryza glaberrima	96.00	8.00e-63	231.00
IUUC-Ogu-078731	Oryza glumaepatula	96.50	3.00e-63	233.00
IUUC-Oin-079688	Oryza indica	96.40	2.00e-53	199.00
IUUC-Oni-082969	Oryza nivara	96.00	8.00e-63	231.00
IUUC-Opu-083793	Oryza punctata	90.00	1.00e-39	154.00
IUUC-Oru-084314	Oryza rufipogon	95.50	6.00e-61	225.00
IUUC-Osa-085921	Oryza sativa	96.00	9.00e-63	231.00
IUUC-Tae-122985	Triticum aestivum	69.74	7.00e-22	95.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence