iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lpe-050825

Ensembl Protein ID

LPERR02G13620.1

UniProt Accession

A0A0D9VG23; A0A0D9VG23_9ORYZ

Protein Name

RING-type E3 ubiquitin transferase

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
LPERR02G13620	LPERR02G13620.1	LPERR02G13620.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.90e-33	113.6	76	148

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceenss 74
           vpe+flCpIs e+MrdPvvl+sG+tydr+ I++wl+ g++tcP t+q l+++ l+Pn+ +r++i +wc en++
   Q: 76   VPEQFLCPISSEIMRDPVVLASGQTYDRRFIQEWLNAGNRTCPQTQQVLSNTILIPNHLVRSMIAQWCTENGI 148
           8*********************************************************************986 PP

Organism

Leersia perrieri

Protein Sequence
(Fasta)

MAKSTPSAAA EELRRRLRRL VAAVTSGGAG DAAFDAAGEA LAALRDAELG GQRRKDGAAA 60
GVGAGAERGS PAEAAVPEQF LCPISSEIMR DPVVLASGQT YDRRFIQEWL NAGNRTCPQT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCAAGT CGACCCCCTC CGCGGCGGCC GAGGAGCTGC GGCGCCGCCT GCGCCGCCTC 60
GTCGCCGCCG TGACGTCCGG CGGTGCAGGG GACGCGGCGT TCGACGCGGC GGGGGAGGCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000225--Armadillo
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF00514--Arm
PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006420	Arabidopsis lyrata	48.01	4.00e-113	400.00
IUUC-Ath-007457	Arabidopsis thaliana	50.38	2.00e-114	405.00
IUUC-Bdi-014069	Brachypodium distachyon	84.58	0.00e+00	654.00
IUUC-Bol-015764	Brassica oleracea	50.13	5.00e-109	387.00
IUUC-Bra-017759	Brassica rapa	50.65	1.00e-109	389.00
IUUC-Gma-043565	Glycine max	50.89	2.00e-106	379.00
IUUC-Mtr-058046	Medicago truncatula	51.30	9.00e-106	376.00
IUUC-Mac-065616	Musa acuminata	66.32	2.00e-144	504.00
IUUC-Oba-075311	Oryza barthii	94.35	0.00e+00	693.00
IUUC-Obr-076232	Oryza brachyantha	92.20	0.00e+00	686.00
IUUC-Ogl-077647	Oryza glaberrima	94.36	0.00e+00	723.00
IUUC-Ogu-078448	Oryza glumaepatula	94.57	0.00e+00	724.00
IUUC-Oin-079693	Oryza indica	94.62	0.00e+00	695.00
IUUC-Olo-080462	Oryza longistaminata	94.55	0.00e+00	722.00
IUUC-Ome-081796	Oryza meridionalis	94.53	0.00e+00	716.00
IUUC-Oni-082158	Oryza nivara	94.83	0.00e+00	726.00
IUUC-Opu-084131	Oryza punctata	94.29	0.00e+00	721.00
IUUC-Oru-084335	Oryza rufipogon	94.83	0.00e+00	726.00
IUUC-Osa-085556	Oryza sativa	94.83	0.00e+00	725.00
IUUC-Pop-099087	Populus trichocarpa	51.95	2.00e-112	398.00
IUUC-Ppe-101662	Prunus persica	53.89	9.00e-120	422.00
IUUC-Sit-110812	Setaria italica	79.81	0.00e+00	630.00
IUUC-Sly-110911	Solanum lycopersicum	51.83	7.00e-118	416.00
IUUC-Stu-112732	Solanum tuberosum	52.34	8.00e-119	419.00
IUUC-Sbi-114814	Sorghum bicolor	80.71	0.00e+00	655.00
IUUC-Tca-121080	Theobroma cacao	53.12	2.00e-122	431.00
IUUC-Vvi-131590	Vitis vinifera	54.17	1.00e-123	436.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence