iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Lch-050634

Ensembl Protein ID

ENSLACP00000012313.1

UniProt Accession

H3ARP2; H3ARP2_LATCH

Genbank Protein ID

ENSLACP00000012313

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AFYH01143898

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLACG00000010842.1	ENSLACT00000012406.1	ENSLACP00000012313.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-37	124.9	107	141
UBD/Beta-Prp	2.10e-53	181.6	26	305

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtg 33
           gH+++v+c++f  + t ++sGs D +i++WD r+ 
   Q: 107  GHAGKVNCIQFnEEsTVIISGSIDSSIRCWDCRSR 141
           8**********73359***************9875 PP

UBD/Beta-Prp

   S: 11   svitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           + +++v f  d+++++tg+ d+++k+w+  +g++l+++sgh  ev +v+ s d + l ++s D+t+ +wd+ +g+ v++++gh  +v +
   Q: 26   GAVRAVRFNADGNYCLTGGSDKSVKLWNPYKGTFLKTYSGHGYEVLDVTGSFDNSQLCSCSADKTVILWDVASGQVVRKFRGHAGKVNC 114
           567899*******************************************9999999********************************* PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqclee.tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvysls 187
           ++f++++ +++sGs d+ ir+wd ++++     +l++ ++ v++v+v++    + sGs D++vr +dl++g+l  +  g   ++++s+ 
   Q: 115  IQFNEESTVIISGSIDSSIRCWDCRSRKPDAIqVLNEAKDGVSSVKVSD--HEILSGSVDGQVRRYDLRMGELFADYVG---SPITSVC 198
           ***************************9865459999999999999999..89**********************9977...9****** PP
   S: 188  fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs..pnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavls 274
           f+++g++ +s sld+t++l d +tge + +++gh++  + ++ +  ++d++++s+s+Dg ++ Wdl  g l  +l   +s v s ++ +
   Q: 199  FSKDGQCTLSSSLDSTLRLLDKETGELLGEYKGHKNKEYKLDCClnEKDTHVLSCSEDGKVYYWDLVEGSLALSLPVGKSVVQSLSF-H 286
           ***********************************9999999988899******************************988888888.* PP
   S: 275  fgdnvlvlgsedskvniwkl 294
           + d+ l++++e ++v++w  
   Q: 287  PADPCLLTATE-GSVHLWRE 305
           *********99.79999975 PP

Organism

Latimeria chalumnae

Protein Sequence
(Fasta)

MAFPLPKPKK PELPSKVIRI LECKQGAVRA VRFNADGNYC LTGGSDKSVK LWNPYKGTFL 60
KTYSGHGYEV LDVTGSFDNS QLCSCSADKT VILWDVASGQ VVRKFRGHAG KVNCIQFNEE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CATTTCCATT TTTTTCTTGA AATAAAATAC TATAAGCTGG AAAATCAGCC ACAATTAACG 60
GGTGAACTAA TAAAAATACC TTGAGATTAA TAAGAAATTA GAATTTTTAC AAAAATGTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR016346--Guanine_nucleotide-bd_bsu
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0007165--P:signal transduction

KEGG

lcm:102358251

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	77.96	8.00e-142	496.00
IUUC-Atr-002647	Amborella trichopoda	48.64	4.00e-85	307.00
IUUC-Aca-004948	Anolis carolinensis	81.25	7.00e-138	483.00
IUUC-Aly-006489	Arabidopsis lyrata	48.14	8.00e-77	280.00
IUUC-Ath-007099	Arabidopsis thaliana	47.96	2.00e-76	278.00
IUUC-Acl-008374	Aspergillus clavatus	37.95	5.00e-45	174.00
IUUC-Afl-008506	Aspergillus flavus	40.33	1.00e-49	189.00
IUUC-Afu-009098	Aspergillus fumigatus	33.23	4.00e-40	158.00
IUUC-Ang-009705	Aspergillus niger	32.72	1.00e-42	166.00
IUUC-Aor-010031	Aspergillus oryzae	40.33	1.00e-49	189.00
IUUC-Ame-011056	Astyanax mexicanus	74.26	4.00e-136	477.00
IUUC-Bgr-012109	Blumeria graminis	38.73	4.00e-50	191.00
IUUC-Bta-012476	Bos taurus	77.96	2.00e-142	498.00
IUUC-Bci-013860	Botrytis cinerea	34.80	4.00e-41	161.00
IUUC-Bdi-014565	Brachypodium distachyon	49.15	1.00e-83	302.00
IUUC-Bol-016204	Brassica oleracea	48.64	3.00e-77	281.00
IUUC-Bra-018093	Brassica rapa	48.64	4.00e-77	281.00
IUUC-Cel-018500	Caenorhabditis elegans	47.59	3.00e-77	281.00
IUUC-Cja-019279	Callithrix jacchus	78.29	1.00e-133	469.00
IUUC-Cfa-020516	Canis familiaris	78.95	2.00e-143	501.00
IUUC-Cpo-021427	Cavia porcellus	78.29	5.00e-133	466.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	43.81	9.00e-71	259.00
IUUC-Csa-023449	Chlorocebus sabaeus	77.96	6.00e-134	469.00
IUUC-Cin-025637	Ciona intestinalis	61.59	2.00e-106	379.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	35.76	1.00e-47	183.00
IUUC-Cne-026994	Cryptococcus neoformans	34.56	6.00e-48	184.00
IUUC-Dre-028239	Danio rerio	74.92	6.00e-130	456.00
IUUC-Dno-029408	Dasypus novemcinctus	78.95	7.00e-142	496.00
IUUC-Dor-030684	Dipodomys ordii	78.87	7.00e-87	313.00
IUUC-Dse-031344	Dothistroma septosporum	44.40	4.00e-53	201.00
IUUC-Dme-031634	Drosophila melanogaster	44.26	7.00e-72	263.00
IUUC-Ete-033126	Echinops telfairi	71.38	4.00e-125	440.00
IUUC-Eca-034356	Equus caballus	69.41	8.00e-120	422.00
IUUC-Eeu-035196	Erinaceus europaeus	76.92	5.00e-62	231.00
IUUC-Fca-036231	Felis catus	79.28	2.00e-143	501.00
IUUC-Fox-038076	Fusarium oxysporum	35.71	5.00e-50	191.00
IUUC-Fso-038093	Fusarium solani	36.08	2.00e-42	166.00
IUUC-Gmo-039056	Gadus morhua	73.93	4.00e-129	454.00
IUUC-Ggr-039981	Gaeumannomyces graminis	31.91	1.00e-40	160.00
IUUC-Gga-041042	Gallus gallus	76.32	8.00e-142	496.00
IUUC-Gac-042638	Gasterosteus aculeatus	72.94	3.00e-131	460.00
IUUC-Gma-042689	Glycine max	49.66	1.00e-86	312.00
IUUC-Ggo-044720	Gorilla gorilla	78.62	2.00e-134	471.00
IUUC-Hsa-046056	Homo sapiens	78.95	6.00e-135	473.00
IUUC-Hvu-047675	Hordeum vulgare	43.83	2.00e-77	281.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	76.64	9.00e-141	492.00
IUUC-Lpe-051470	Leersia perrieri	48.12	2.00e-82	298.00
IUUC-Loc-052452	Lepisosteus oculatus	75.58	9.00e-130	456.00
IUUC-Lma-053235	Leptosphaeria maculans	39.76	2.00e-25	109.00
IUUC-Laf-054315	Loxodonta africana	77.96	8.00e-135	472.00
IUUC-Mcc-054923	Macaca mulatta	78.29	2.00e-134	471.00
IUUC-Mor-056936	Magnaporthe oryzae	35.23	2.00e-45	176.00
IUUC-Mtr-058595	Medicago truncatula	50.88	2.00e-85	308.00
IUUC-Mla-058902	Melampsora laricipopulina	37.63	3.00e-55	208.00
IUUC-Mvi-060471	Microbotryum violaceum	42.95	1.00e-69	256.00
IUUC-Mmr-061665	Microcebus murinus	78.95	2.00e-143	501.00
IUUC-Mdo-062750	Monodelphis domestica	74.83	4.00e-122	430.00
IUUC-Mmu-063750	Mus musculus	76.97	3.00e-141	494.00
IUUC-Mac-065441	Musa acuminata	48.30	5.00e-85	307.00
IUUC-Mpu-066863	Mustela putorius furo	78.29	3.00e-142	497.00
IUUC-Mlu-067645	Myotis lucifugus	77.63	3.00e-140	491.00
IUUC-Nfi-068549	Neosartorya fischeri	35.39	7.00e-45	174.00
IUUC-Ncr-068816	Neurospora crassa	33.75	9.00e-38	150.00
IUUC-Nle-069457	Nomascus leucogenys	78.29	5.00e-135	473.00
IUUC-Opr-070874	Ochotona princeps	79.26	5.00e-62	230.00
IUUC-Ont-071674	Oreochromis niloticus	73.60	8.00e-116	409.00
IUUC-Oan-073391	Ornithorhynchus anatinus	81.91	2.00e-147	514.00
IUUC-Ocu-074186	Oryctolagus cuniculus	76.97	4.00e-134	470.00
IUUC-Oba-075414	Oryza barthii	48.75	3.00e-79	288.00
IUUC-Obr-076739	Oryza brachyantha	47.44	2.00e-80	291.00
IUUC-Ogl-076962	Oryza glaberrima	47.78	1.00e-81	296.00
IUUC-Ogu-078831	Oryza glumaepatula	47.78	1.00e-81	296.00
IUUC-Oin-079985	Oryza indica	47.44	1.00e-81	296.00
IUUC-Ome-081333	Oryza meridionalis	47.12	7.00e-75	273.00
IUUC-Oni-082558	Oryza nivara	47.44	1.00e-81	296.00
IUUC-Opu-084091	Oryza punctata	48.81	2.00e-84	305.00
IUUC-Oru-085253	Oryza rufipogon	47.23	1.00e-75	276.00
IUUC-Osa-086077	Oryza sativa	47.44	1.00e-81	296.00
IUUC-Ola-086946	Oryzias latipes	72.28	3.00e-130	457.00
IUUC-Olu-087604	Ostreococcus lucimarinus	38.19	6.00e-51	194.00
IUUC-Oga-088681	Otolemur garnettii	75.99	1.00e-139	488.00
IUUC-Oar-089913	Ovis aries	77.63	9.00e-140	489.00
IUUC-Ptr-091343	Pan troglodytes	78.55	4.00e-134	470.00
IUUC-Pan-092078	Papio anubis	77.96	6.00e-134	469.00
IUUC-Psi-093190	Pelodiscus sinensis	82.57	4.00e-147	513.00
IUUC-Pno-095078	Phaeosphaeria nodorum	39.49	3.00e-50	191.00
IUUC-Ppa-095777	Physcomitrella patens	50.85	2.00e-86	311.00
IUUC-Pfo-097153	Poecilia formosa	73.60	8.00e-125	439.00
IUUC-Pab-098307	Pongo abelii	78.03	2.00e-132	464.00
IUUC-Pop-099315	Populus trichocarpa	50.00	2.00e-79	288.00
IUUC-Pca-100538	Procavia capensis	78.81	9.00e-123	432.00
IUUC-Ppe-101632	Prunus persica	48.14	2.00e-86	311.00
IUUC-Pva-102484	Pteropus vampyrus	78.62	2.00e-142	498.00
IUUC-Pgr-103495	Puccinia graminis	40.14	5.00e-62	231.00
IUUC-Ptt-103975	Puccinia triticina	39.45	4.00e-60	224.00
IUUC-Pte-104354	Pyrenophora teres	37.82	3.00e-42	165.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	38.18	9.00e-42	163.00
IUUC-Rno-105655	Rattus norvegicus	77.63	1.00e-141	494.00
IUUC-Sha-107130	Sarcophilus harrisii	79.04	8.00e-99	352.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	39.21	2.00e-54	205.00
IUUC-Spo-108131	Schizosaccharomyces pombe	42.65	9.00e-57	213.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	34.80	4.00e-42	165.00
IUUC-Smo-109004	Selaginella moellendorffii	49.49	5.00e-77	280.00
IUUC-Sit-110508	Setaria italica	48.46	2.00e-82	298.00
IUUC-Sly-111093	Solanum lycopersicum	47.28	9.00e-76	276.00
IUUC-Stu-112380	Solanum tuberosum	47.28	1.00e-75	275.00
IUUC-Sar-113127	Sorex araneus	80.00	4.00e-62	231.00
IUUC-Sbi-114461	Sorghum bicolor	47.78	4.00e-81	294.00
IUUC-Sre-115020	Sporisorium reilianum	39.08	3.00e-39	156.00
IUUC-Ssc-115632	Sus scrofa	77.96	2.00e-141	494.00
IUUC-Tru-118039	Takifugu rubripes	71.29	2.00e-120	424.00
IUUC-Tsy-119239	Tarsius syrichta	76.92	5.00e-73	267.00
IUUC-Tni-120097	Tetraodon nigroviridis	70.03	1.00e-116	412.00
IUUC-Tca-121695	Theobroma cacao	50.34	7.00e-88	317.00
IUUC-Tre-122182	Trichoderma reesei	33.01	3.00e-42	165.00
IUUC-Tvi-122429	Trichoderma virens	35.02	4.00e-47	181.00
IUUC-Tae-125136	Triticum aestivum	48.46	7.00e-83	300.00
IUUC-Tur-126216	Triticum urartu	48.46	2.00e-82	298.00
IUUC-Tme-127030	Tuber melanosporum	42.22	4.00e-58	217.00
IUUC-Tbe-127686	Tupaia belangeri	74.60	4.00e-79	288.00
IUUC-Ttr-128770	Tursiops truncatus	77.63	1.00e-141	495.00
IUUC-Uma-129446	Ustilago maydis	34.84	2.00e-36	147.00
IUUC-Vda-129680	Verticillium dahliae	34.43	3.00e-35	141.00
IUUC-Vvi-131292	Vitis vinifera	49.83	1.00e-86	312.00
IUUC-Xtr-132204	Xenopus tropicalis	78.62	2.00e-141	494.00
IUUC-Xma-133727	Xiphophorus maculatus	73.60	2.00e-123	435.00
IUUC-Zma-135908	Zea mays	47.78	3.00e-75	274.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence